RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ADAM18Q9Y3Q7 739 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 TRAV1-2A0A0B4J238 106 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 SURF4O15260 269 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 PLGP00747 810 aaPredicted RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ID4P47928 161 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 DDX39BQ13838 428 aaKnown RBP8.43□□□□□ -1.06
PDGFC-201ENST00000274071 DUSP5Q16690 384 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 PCGF3Q3KNV8 242 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 TMEM69Q5SWH9 247 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 STPG1Q5TH74 334 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 OR2T2Q6IF00 324 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 BTNL8Q6UX41 500 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 RPTNQ6XPR3 784 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF573Q86YE8 665 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF280BQ86YH2 543 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 SEMA6DQ8NFY4 1073 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 OR4K5Q8NGD3 323 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 KCTD13Q8WZ19 329 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 PGLYRP3Q96LB9 341 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 SLC35A5Q9BS91 424 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 ACTRT3Q9BYD9 372 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 C1orf198Q9H425 327 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 KLK14Q9P0G3 267 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 SH3BGRL2Q9UJC5 107 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 GJD2Q9UKL4 321 aa8.43□□□□□ -1.06
PDGFC-201ENST00000274071 RALGAPA2Q2PPJ7 1873 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 TCRBV21S2A2A0A5A6 115 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 H7C417 338 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 GPR182O15218 404 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 PMS2P2O95744 297 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 PCCBP05166 539 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 CD46P15529 392 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 RASGEF1BQ0VAM2 473 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 LCTLQ6UWM7 567 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 TPGS1Q6ZTW0 290 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 PAQR9Q6ZVX9 377 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 CD163Q86VB7 1156 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 IQCHQ86VS3 1027 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 ACBD7Q8N6N7 88 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 OR4K1Q8NGD4 311 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF775Q96BV0 537 aaPredicted RBP8.42□□□□□ -1.06
PDGFC-201ENST00000274071 CWH43Q9H720 699 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 LPAR2Q9HBW0 351 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 RPH3ALQ9UNE2 315 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 FOXJ3Q9UPW0 622 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 OARD1Q9Y530 152 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 WIF1Q9Y5W5 379 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 NYNRINQ9P2P1 1898 aaKnown RBP8.42□□□□□ -1.06
PDGFC-201ENST00000274071 A0A0G2JN53 185 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 TEX13DA0A0J9YY54 714 aaPredicted RBP8.42□□□□□ -1.06
PDGFC-201ENST00000274071 SMIM28A0A1B0GU29 152 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 C17orf102A2RUQ5 167 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF208O43345 1280 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 CTNSO60931 367 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 STK16O75716 305 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 TBX6O95947 436 aaPredicted RBP8.42□□□□□ -1.06
PDGFC-201ENST00000274071 TRGC2P03986 189 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 TBPP20226 339 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 FAUP35544 74 aaKnown RBP8.42□□□□□ -1.06
PDGFC-201ENST00000274071 ERVFC1-1P60608 527 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 BTG2P78543 158 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 TLE4Q04727 773 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 SERINC3Q13530 473 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 GPNMBQ14956 572 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 ARHGAP19Q14CB8 494 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 HERPUD1Q15011 391 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 ENTPD8Q5MY95 495 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 ARTNQ5T4W7 220 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 C9orf57Q5W0N0 161 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 C1orf94Q6P1W5 598 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 GKN2Q86XP6 184 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 NKAIN3Q8N8D7 197 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 ASB17Q8WXJ9 295 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 GHSRQ92847 366 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 S100A16Q96FQ6 103 aaKnown RBP8.42□□□□□ -1.06
PDGFC-201ENST00000274071 URM1Q9BTM9 101 aaKnown RBP8.42□□□□□ -1.06
PDGFC-201ENST00000274071 SLC25A31Q9H0C2 315 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 RNF39Q9H2S5 420 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 ANKRD10Q9NXR5 420 aa8.42□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF346Q9UL40 294 aaKnown RBP8.42□□□□□ -1.06
PDGFC-201ENST00000274071 LOC100509620A0A075B734 347 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 A0A0U1RQV5 110 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 TMEM88BA6NKF7 163 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 GGCTO75223 188 aaKnown RBP8.41□□□□□ -1.06
PDGFC-201ENST00000274071 ABLIM3O94929 683 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 MBPP02686 304 aaPredicted RBP8.41□□□□□ -1.06
PDGFC-201ENST00000274071 CXCL1P09341 107 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 CDK2P24941 298 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 HTR1FP30939 366 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 S100A7P31151 101 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 RPS26P11Q5JNZ5 115 aaPredicted RBP8.41□□□□□ -1.06
PDGFC-201ENST00000274071 C1orf185Q5T7R7 199 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 MRM1Q6IN84 353 aaKnown RBP8.41□□□□□ -1.06
PDGFC-201ENST00000274071 TRIM40Q6P9F5 258 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 TMEM220Q6QAJ8 160 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 TAS1R1Q7RTX1 841 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 TMED4Q7Z7H5 227 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 OR5AK3PQ8NH89 298 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 FIBINQ8TAL6 211 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 ADAMTS17Q8TE56 1095 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms