RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 PLRG1O43660 514 aaKnown RBP24.99■■□□□ 1.59
CBX4-201ENST00000269397 CCR4P51679 360 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 CTXN1P60606 82 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 ENPP2Q13822 863 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 FAM74A1Q5RGS3 127 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 DPY19L4Q7Z388 723 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 ZSCAN2Q7Z7L9 614 aaPredicted RBP24.99■■□□□ 1.59
CBX4-201ENST00000269397 ZNF227Q86WZ6 799 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 SP7Q8TDD2 431 aaPredicted RBP24.99■■□□□ 1.59
CBX4-201ENST00000269397 IGKV1D-42A0A075B6H8 117 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 SDC3O75056 442 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 FCARP24071 287 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 MAPK3P27361 379 aaPredicted RBP24.99■■□□□ 1.59
CBX4-201ENST00000269397 LRRC69Q6ZNQ3 347 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 C17orf107Q6ZR85 190 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 FOXN4Q96NZ1 517 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 EXO5Q9H790 373 aa24.99■■□□□ 1.59
CBX4-201ENST00000269397 TGFBR3LH3BV60 316 aa24.98■■□□□ 1.59
CBX4-201ENST00000269397 CTAG2O75638 210 aa24.98■■□□□ 1.59
CBX4-201ENST00000269397 MYOGP15173 224 aa24.98■■□□□ 1.59
CBX4-201ENST00000269397 CDH26Q8IXH8 852 aa24.98■■□□□ 1.59
CBX4-201ENST00000269397 LMF1Q96S06 567 aa24.98■■□□□ 1.59
CBX4-201ENST00000269397 STEAP1Q9UHE8 339 aa24.98■■□□□ 1.59
CBX4-201ENST00000269397 ZNF230Q9UIE0 474 aaPredicted RBP24.98■■□□□ 1.59
CBX4-201ENST00000269397 LAMP5Q9UJQ1 280 aa24.98■■□□□ 1.59
CBX4-201ENST00000269397 TRBV5-5A0A0J9YX44 114 aa24.98■■□□□ 1.59
CBX4-201ENST00000269397 A0A1B0GTQ1 180 aa24.98■■□□□ 1.59
CBX4-201ENST00000269397 ABHD16AO95870 558 aa24.98■■□□□ 1.59
CBX4-201ENST00000269397 SLC35E2P0CK97 266 aa24.98■■□□□ 1.59
CBX4-201ENST00000269397 RPS4XP62701 263 aaKnown RBP24.98■■□□□ 1.59
CBX4-201ENST00000269397 OR5M9Q8NGP3 310 aa24.98■■□□□ 1.59
CBX4-201ENST00000269397 MRI1Q9BV20 369 aa24.98■■□□□ 1.59
CBX4-201ENST00000269397 APODP05090 189 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 FNTBP49356 437 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 LRFN4Q6PJG9 635 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 DNM1P46Q6ZS02 220 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 OR2G2Q8NGZ5 317 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 VSTM2LQ96N03 204 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 IL23AQ9NPF7 189 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 OR4C45A6NMZ5 311 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 GMFGO60234 142 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 AKR7A3O95154 331 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 ACHEP22303 614 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 CALCRP30988 508 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 GRK6P43250 576 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 POU3F4P49335 361 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 NKAIN2Q5VXU1 208 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 LRRN1Q6UXK5 716 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 NAXDQ8IW45 347 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 OR6N1Q8NGY5 312 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 ATOH1Q92858 354 aaPredicted RBP24.97■■□□□ 1.59
CBX4-201ENST00000269397 LMF2Q9BU23 707 aaKnown RBP24.97■■□□□ 1.59
CBX4-201ENST00000269397 LDAHQ9H6V9 325 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 PRDM9Q9NQV7 894 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 CDV3Q9UKY7 258 aaKnown RBP24.97■■□□□ 1.59
CBX4-201ENST00000269397 OR10H1Q9Y4A9 318 aa24.97■■□□□ 1.59
CBX4-201ENST00000269397 CSRP1P21291 193 aaKnown RBP24.96■■□□□ 1.59
CBX4-201ENST00000269397 MNDAP41218 407 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 PRPS1P60891 318 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 TMEM31Q5JXX7 168 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 PRSS35Q8N3Z0 413 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 AMELYQ99218 206 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 D6RAR5 112 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 PLATP00750 562 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 ITGA5P08648 1049 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 CSF1P09603 554 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 TPMTP51580 245 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 ZNF141Q15928 474 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 ALG10Q5BKT4 473 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 TMED4Q7Z7H5 227 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 FANCMQ8IYD8 2048 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 C15orf40Q8WUR7 153 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 MRPS24Q96EL2 167 aaKnown RBP24.96■■□□□ 1.59
CBX4-201ENST00000269397 RBM18Q96H35 190 aaKnown RBP24.96■■□□□ 1.59
CBX4-201ENST00000269397 ELF4Q99607 663 aaPredicted RBP24.96■■□□□ 1.59
CBX4-201ENST00000269397 CCDC3Q9BQI4 270 aa24.96■■□□□ 1.59
CBX4-201ENST00000269397 C2orf16Q68DN1 1984 aa24.95■■□□□ 1.59
CBX4-201ENST00000269397 SPEGQ15772 3267 aa24.95■■□□□ 1.59
CBX4-201ENST00000269397 SERINC4A6NH21 518 aa24.95■■□□□ 1.58
CBX4-201ENST00000269397 ELOA3DA6NLF2 546 aaPredicted RBP24.95■■□□□ 1.58
CBX4-201ENST00000269397 GMFBP60983 142 aa24.95■■□□□ 1.58
CBX4-201ENST00000269397 UBXN2BQ14CS0 331 aa24.95■■□□□ 1.58
CBX4-201ENST00000269397 ELOA3BQ3SY89 546 aa24.95■■□□□ 1.58
CBX4-201ENST00000269397 ANKRD16Q6P6B7 361 aa24.95■■□□□ 1.58
CBX4-201ENST00000269397 FAM122BQ7Z309 247 aa24.95■■□□□ 1.58
CBX4-201ENST00000269397 ELOA3Q8NG57 546 aa24.95■■□□□ 1.58
CBX4-201ENST00000269397 BAHD1Q8TBE0 780 aaPredicted RBP24.95■■□□□ 1.58
CBX4-201ENST00000269397 POFUT1Q9H488 388 aa24.95■■□□□ 1.58
CBX4-201ENST00000269397 GTF2A1LQ9UNN4 478 aa24.95■■□□□ 1.58
CBX4-201ENST00000269397 NPIPB9F8W1W9 429 aa24.95■■□□□ 1.58
CBX4-201ENST00000269397 FOXS1O43638 330 aa24.95■■□□□ 1.58
CBX4-201ENST00000269397 HOXB13Q92826 284 aaPredicted RBP24.95■■□□□ 1.58
CBX4-201ENST00000269397 PPP1R14AQ96A00 147 aa24.95■■□□□ 1.58
CBX4-201ENST00000269397 KXD1Q9BQD3 176 aa24.95■■□□□ 1.58
CBX4-201ENST00000269397 APMAPQ9HDC9 416 aa24.95■■□□□ 1.58
CBX4-201ENST00000269397 OIP5O43482 229 aa24.94■■□□□ 1.58
CBX4-201ENST00000269397 AKAIN1P0CW23 69 aa24.94■■□□□ 1.58
CBX4-201ENST00000269397 EXD3Q8N9H8 876 aa24.94■■□□□ 1.58
CBX4-201ENST00000269397 TSEN15Q8WW01 171 aaKnown RBP24.94■■□□□ 1.58
CBX4-201ENST00000269397 RELTQ969Z4 430 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms