RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 ZNF566Q969W8 418 aa11.21□□□□□ -0.61
SS18-202ENST00000269138 LRR1Q96L50 414 aa11.21□□□□□ -0.61
SS18-202ENST00000269138 MED18Q9BUE0 208 aa11.21□□□□□ -0.61
SS18-202ENST00000269138 DGCR6LQ9BY27 220 aa11.21□□□□□ -0.61
SS18-202ENST00000269138 MRPL13Q9BYD1 178 aaKnown RBP11.21□□□□□ -0.61
SS18-202ENST00000269138 SEMA6AQ9H2E6 1030 aa11.21□□□□□ -0.61
SS18-202ENST00000269138 CRLF2Q9HC73 371 aa11.21□□□□□ -0.61
SS18-202ENST00000269138 GLTPQ9NZD2 209 aa11.21□□□□□ -0.61
SS18-202ENST00000269138 NDRG3Q9UGV2 375 aa11.21□□□□□ -0.61
SS18-202ENST00000269138 MGAT4BQ9UQ53 548 aa11.21□□□□□ -0.61
SS18-202ENST00000269138 IER3IP1Q9Y5U9 82 aa11.21□□□□□ -0.61
SS18-202ENST00000269138 PKDREJQ9NTG1 2253 aa11.21□□□□□ -0.62
SS18-202ENST00000269138 A0A1W2PR80 420 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 RPL36A-HNRNPH2H7BZ11 118 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 PPP1R3DO95685 299 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 IGHG1P01857 330 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 TP53P04637 393 aaPredicted RBP11.2□□□□□ -0.62
SS18-202ENST00000269138 EPXP11678 715 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 CLRN1P58418 232 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 TAF11Q15544 211 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 STK11Q15831 433 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 SHQ1Q6PI26 577 aaKnown RBP11.2□□□□□ -0.62
SS18-202ENST00000269138 DPY19L2P2Q6ZN68 376 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 RASSF6Q6ZTQ3 369 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 ARIH2OSQ8N7S6 290 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 OR8D4Q8NGM9 314 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 FAM222BQ8WU58 562 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 MARVELD3Q96A59 401 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 RASD2Q96D21 266 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 DACH2Q96NX9 599 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 MUS81Q96NY9 551 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 GPX7Q96SL4 187 aaPredicted RBP11.2□□□□□ -0.62
SS18-202ENST00000269138 PKP2Q99959 881 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 PLA2G12AQ9BZM1 189 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 ULBP2Q9BZM5 246 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 NRIP3Q9NQ35 241 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 CDH10Q9Y6N8 788 aa11.2□□□□□ -0.62
SS18-202ENST00000269138 A0A096LPE4 126 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 IGKV1D-43A0A0B4J1Z2 117 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 TEX13CA0A0J9YWL9 993 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 A0A1W2PPZ6 126 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 ARRDC5A6NEK1 342 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 H7C1C5 153 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 IMPA2O14732 288 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 ARHGEF9O43307 516 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 SEC14L2O76054 403 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 SOX14O95416 240 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 QDPRP09417 244 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 FCGR1AP12314 374 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 PEX19P40855 299 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 LCN6P62502 163 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 TAB1Q15750 504 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 HIST3H3Q16695 136 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 HIKESHIQ53FT3 197 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 MESTQ5EB52 335 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 CLEC12AQ5QGZ9 265 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 KLHL17Q6TDP4 642 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 ABHD12BQ7Z5M8 362 aaPredicted RBP11.19□□□□□ -0.62
SS18-202ENST00000269138 WFDC8Q8IUA0 241 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 WDR31Q8NA23 367 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 NOXO1Q8NFA2 376 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 OR1K1Q8NGR3 316 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 OR5K1Q8NHB7 308 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 BCL2L2Q92843 193 aaPredicted RBP11.19□□□□□ -0.62
SS18-202ENST00000269138 MCHR2Q969V1 340 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 NMD3Q96D46 503 aaKnown RBP11.19□□□□□ -0.62
SS18-202ENST00000269138 KCNK17Q96T54 332 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 IFT27Q9BW83 186 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 OR10A4Q9H209 315 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 NELFAQ9H3P2 528 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 S100A14Q9HCY8 104 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 B3GAT2Q9NPZ5 323 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 GRHPRQ9UBQ7 328 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 REV1Q9UBZ9 1251 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 KCNN3Q9UGI6 736 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 FLNBO75369 2602 aaKnown RBP11.19□□□□□ -0.62
SS18-202ENST00000269138 ANKHD1Q8IWZ3 2542 aaKnown RBP11.19□□□□□ -0.62
SS18-202ENST00000269138 OR5H1A6NKK0 313 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 SOCS2O14508 198 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 SIAH2O43255 324 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 PRF1P14222 555 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 PPP3CBP16298 524 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 SLC6A6P31641 620 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 TGFBR3Q03167 851 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 FMODQ06828 376 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 ZFP1Q6P2D0 407 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 CD300LDQ6UXZ3 194 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 HDDC2Q7Z4H3 204 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 OR52N5Q8NH56 324 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 HTRA1Q92743 480 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 NRBF2Q96F24 287 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 CENPNQ96H22 339 aaPredicted RBP11.19□□□□□ -0.62
SS18-202ENST00000269138 ZNF570Q96NI8 536 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 ERMAPQ96PL5 475 aaPredicted RBP11.19□□□□□ -0.62
SS18-202ENST00000269138 BDH2Q9BUT1 245 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 NDEL1Q9GZM8 345 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 ASH1LQ9NR48 2969 aaKnown RBP11.19□□□□□ -0.62
SS18-202ENST00000269138 IL20Q9NYY1 176 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 POFUT2Q9Y2G5 429 aa11.19□□□□□ -0.62
SS18-202ENST00000269138 PRR14LQ5THK1 2151 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms