RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 XKRYO14609 159 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 VAMP5O95183 116 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 IFNGP01579 166 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 ADRA2AP08913 450 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 APEHP13798 732 aaKnown RBP8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 ZNF3P17036 446 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 PYCR1P32322 319 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 SELENOPP49908 381 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 DAP3P51398 398 aaKnown RBP8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 CHN2P52757 468 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC16A1P53985 500 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 CDH15P55291 814 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 APOFQ13790 326 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 ETFDHQ16134 617 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 OCLNQ16625 522 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 PHYHD1Q5SRE7 291 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 RTL6Q6ICC9 239 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 NIPAL3Q6P499 406 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 LYPD4Q6UWN0 246 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 GFRALQ6UXV0 394 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 SHFQ7M4L6 423 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 ADGRE4PQ86SQ3 457 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 CD163Q86VB7 1156 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 SMAP2Q8WU79 429 aaPredicted RBP8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 PRRG3Q9BZD7 231 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 NMNAT2Q9BZQ4 307 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 NUAK2Q9H093 628 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 CALHM2Q9HA72 323 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 PAK1IP1Q9NWT1 392 aaPredicted RBP8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 CLCF1Q9UBD9 225 aa8.65□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC22A23A1A5C7 686 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 PRSS37A4D1T9 235 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 OR14I1A6ND48 311 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 CCDC182A6NF36 153 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 ZNF726A6NNF4 738 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 MPZL2O60487 215 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 FAM20BO75063 409 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 PGA4P0DJD7 388 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 PGA3P0DJD8 388 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 SFTPCP11686 197 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 ABOP16442 354 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 SPI1P17947 270 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC2A5P22732 501 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 CRHBPP24387 322 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 MVKQ03426 396 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 POU4F3Q15319 338 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 ACSF3Q4G176 576 aaPredicted RBP8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 TMEM201Q5SNT2 666 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 NUFIP2Q7Z417 695 aaKnown RBP8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 P4HA3Q7Z4N8 544 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 GCNT2Q8N0V5 402 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 OR6V1Q8N148 313 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 C9orf106Q8NAJ2 232 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 GGHQ92820 318 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 OR2M2Q96R28 347 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 SF3B5Q9BWJ5 86 aaKnown RBP8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 PAQR5Q9NXK6 330 aaPredicted RBP8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 H2AFY2Q9P0M6 372 aaPredicted RBP8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 SH3BGRL2Q9UJC5 107 aa8.64□□□□□ -1.03
SNRNP40-201ENST00000263694 INTS1Q8N201 2190 aaKnown RBP8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 A6NIZ1 184 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 NPIPB13A6NJU9 1138 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 NPIPB4C9JG80 1138 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC16A7O60669 478 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 ZNF432O94892 652 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 RENP00797 406 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 IGHV3-9P01782 118 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 LYNP07948 512 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 CTLA4P16410 223 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 PAICSP22234 425 aaKnown RBP8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 CENPAP49450 140 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 CDH11P55287 796 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 CLRN1P58418 232 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 RAP1BP61224 184 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 RPS7P62081 194 aaKnown RBP8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 RAP1AP62834 184 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 ZNF91Q05481 1191 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC25A30Q5SVS4 291 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 NXNL2Q5VZ03 156 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 SEM1Q6ZVN7 128 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 NCCRP1Q6ZVX7 275 aaPredicted RBP8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 AHSA2Q719I0 299 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 MEPCEQ7L2J0 689 aaKnown RBP8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 AAED1Q7RTV5 226 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 MCEMP1Q8IX19 187 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 TMEM123Q8N131 208 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 ZNF540Q8NDQ6 660 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 OR6X1Q8NH79 312 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 FAM57AQ8TBR7 257 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 CPT1CQ8TCG5 803 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 NSMAFQ92636 917 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 HTRA1Q92743 480 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 ZNF566Q969W8 418 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 ZMYND19Q96E35 227 aaPredicted RBP8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 SLC25A44Q96H78 314 aaPredicted RBP8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 Q96MT0 163 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 NR1H4Q96RI1 486 aaPredicted RBP8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 TEAD3Q99594 435 aa8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 MRPL13Q9BYD1 178 aaKnown RBP8.63□□□□□ -1.03
SNRNP40-201ENST00000263694 VSX1Q9NZR4 365 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms