RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 POU3F4P49335 361 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 CTXN1P60606 82 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 TMEM44Q2T9K0 475 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 ZNF626Q68DY1 528 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 OR52W1Q6IF63 320 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 TMPPEQ6ZT21 453 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 TMEM200AQ86VY9 491 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 FOXRED2Q8IWF2 684 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 BPIFCQ8NFQ6 507 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 OR51A2Q8NGJ7 313 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 OR5AK2Q8NH90 309 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 ROBO4Q8WZ75 1007 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 SHARPINQ9H0F6 387 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 ASF1BQ9NVP2 202 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 CDV3Q9UKY7 258 aaKnown RBP11.82□□□□□ -0.52
SNX1-201ENST00000261889 ERVK-19Q9WJR5 959 aa11.82□□□□□ -0.52
SNX1-201ENST00000261889 A0A1B0GUH1 482 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 ANKRD20A5PA0PJZ0 165 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 RBBP9O75884 186 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 MPZL1O95297 269 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 IFNGR1P15260 489 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 PI3P19957 117 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 AVPR2P30518 371 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 ACAA2P42765 397 aaKnown RBP11.81□□□□□ -0.52
SNX1-201ENST00000261889 PSG6Q00889 435 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 MC2RQ01718 297 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 SPOCK1Q08629 439 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 GUCA2BQ16661 112 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 MOGAT2Q3SYC2 334 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 TSSK4Q6SA08 328 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 ADAMTSL4Q6UY14 1074 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 CMIPQ8IY22 773 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 MFSD9Q8NBP5 474 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 ACBD4Q8NC06 268 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 RCBTB1Q8NDN9 531 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 BVESQ8NE79 360 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 OR2AK2Q8NG84 335 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 PARP12Q9H0J9 701 aaKnown RBP11.81□□□□□ -0.52
SNX1-201ENST00000261889 CHRNA9Q9UGM1 479 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 ZNF281Q9Y2X9 895 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 MAP1BP46821 2468 aaKnown RBP11.81□□□□□ -0.52
SNX1-201ENST00000261889 NDUFB2O95178 105 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 CSTAP01040 98 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 ST6GAL1P15907 406 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 UGT2B7P16662 529 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 TLX1P31314 330 aaPredicted RBP11.81□□□□□ -0.52
SNX1-201ENST00000261889 TAS2R43P59537 309 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 BDH1Q02338 343 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 GPR18Q14330 331 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 EIPR1Q53HC9 387 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 TMPRSS11FQ6ZWK6 438 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 LRRTM1Q86UE6 522 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 PDZD9Q8IXQ8 264 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 GVQW1Q8N7I0 195 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 ZNF321PQ8N8H1 164 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 TMIEQ8NEW7 156 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 NKX2-4Q9H2Z4 354 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 FAM60AQ9NP50 221 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 RXFP3Q9NSD7 469 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 FANCMQ8IYD8 2048 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 C13orf42A0A1B0GVH6 325 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 TGFBR3LH3BV60 316 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 NUDT14O95848 222 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 IFNA16P05015 189 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 VAMP1P23763 118 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 STARP49675 285 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 ZNF546Q86UE3 836 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 DND1Q8IYX4 353 aaKnown RBP11.81□□□□□ -0.52
SNX1-201ENST00000261889 DNAJB12Q9NXW2 375 aaKnown RBP11.81□□□□□ -0.52
SNX1-201ENST00000261889 ACSL5Q9ULC5 683 aa11.81□□□□□ -0.52
SNX1-201ENST00000261889 UNC13CQ8NB66 2214 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 OR2M5A3KFT3 312 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 C2orf72A6NCS6 295 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 TMEM235A6NFC5 223 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 OPN1LWP04000 364 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 AMY2AP04746 511 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 HIST1H2ABP04908 130 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 TRA2BP62995 288 aaKnown RBP11.8□□□□□ -0.52
SNX1-201ENST00000261889 EXOSC6Q5RKV6 272 aaKnown RBP11.8□□□□□ -0.52
SNX1-201ENST00000261889 ARHGAP11AQ6P4F7 1023 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 RPL22L1Q6P5R6 122 aaKnown RBP11.8□□□□□ -0.52
SNX1-201ENST00000261889 FIGLAQ6QHK4 219 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 HIST3H2AQ7L7L0 130 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 PM20D2Q8IYS1 436 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 TTLQ8NG68 377 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 HIST1H2ACQ93077 130 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 OR2A5Q96R48 311 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 SLC17A9Q9BYT1 436 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 TAS2R5Q9NYW4 299 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 STEAP1Q9UHE8 339 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 NOP16Q9Y3C1 178 aaKnown RBP11.8□□□□□ -0.52
SNX1-201ENST00000261889 OGG1O15527 345 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 NDUFB6O95139 128 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 TGM6O95932 706 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 OR2T7P0C7T2 308 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 DYRK1AQ13627 763 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 EIF2B1Q14232 305 aaKnown RBP11.8□□□□□ -0.52
SNX1-201ENST00000261889 NR0B2Q15466 257 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 ZCCHC12Q6PEW1 402 aa11.8□□□□□ -0.52
SNX1-201ENST00000261889 BHLHE23Q8NDY6 225 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms