RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 PPP1R36Q96LQ0 422 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 ZNF578Q96N58 590 aaPredicted RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 DPH7Q9BTV6 452 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 GSDMCQ9BYG8 508 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 TM6SF2Q9BZW4 377 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 MFFQ9GZY8 342 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 COMMD4Q9H0A8 199 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 SLC25A51Q9H1U9 297 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 SAV1Q9H4B6 383 aaPredicted RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 IKZF5Q9H5V7 419 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 ASB8Q9H765 288 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 CYB5R1Q9UHQ9 305 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 ENOPH1Q9UHY7 261 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 ABCG2Q9UNQ0 655 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 CSDC2Q9Y534 153 aaKnown RBP3.28□□□□□ -1.88
CCDC54-201ENST00000261058 ADAMTS9Q9P2N4 1935 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 CNTLNQ9NXG0 1405 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 NACADO15069 1562 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 MROH7-TTC4A0A0A0MT08 1334 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 CROCCQ5TZA2 2017 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 CCNB3Q8WWL7 1395 aa3.28□□□□□ -1.88
CCDC54-201ENST00000261058 SERPINE3A8MV23 424 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 E5RI56 91 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 RS1O15537 224 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 LATO43561 262 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 NOS1APO75052 506 aaPredicted RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 SERPIND1P05546 499 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 STSP08842 583 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 UQCRBP14927 111 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 XRCC1P18887 633 aaPredicted RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 TNNI1P19237 187 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 CD40LGP29965 261 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 UGT1A5P35504 534 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 CYLC1P35663 651 aaPredicted RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 RPL4P36578 427 aaKnown RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 NUDT1P36639 197 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 XCR1P46094 333 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 PLK1P53350 603 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 RPL10AP62906 217 aaKnown RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 TNNC1P63316 161 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ZNF33AQ06730 810 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 PIGHQ14442 188 aaPredicted RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 CYP51A1Q16850 503 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 C18orf21Q32NC0 220 aaPredicted RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 FAM120AOSQ5T036 256 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 GPR157Q5UAW9 335 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 LIPNQ5VXI9 398 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ZNF57Q68EA5 555 aaPredicted RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 DUPD1Q68J44 220 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 OR4F3Q6IEY1 312 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 OR2A2Q6IF42 318 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 C4orf22Q6V702 233 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 TRIM69Q86WT6 500 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 C9orf40Q8IXQ3 194 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 SLC38A6Q8IZM9 456 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 C19orf18Q8NEA5 215 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 PROKR2Q8NFJ6 384 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 OR6Q1Q8NGQ2 317 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 OR1L4Q8NGR5 311 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 OR52N1Q8NH53 320 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 DTD1Q8TEA8 209 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 C18orf25Q96B23 403 aaPredicted RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 UPRTQ96BW1 309 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ASB9Q96DX5 294 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 CERS2Q96G23 380 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ZNF514Q96K75 400 aaPredicted RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 YIPF3Q9GZM5 350 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 TNFRSF19Q9NS68 423 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ZNF275Q9NSD4 429 aaPredicted RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 PARVAQ9NVD7 372 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 C1orf123Q9NWV4 160 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 LYARQ9NX58 379 aaKnown RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ZNF229Q9UJW7 825 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 RAB23Q9ULC3 237 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 MAP3K15Q6ZN16 1313 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ZNF318Q5VUA4 2279 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 USP6P35125 1406 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 KIAA1107Q9UPP5 1409 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 A0A0A6YYH2 397 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 A0A1B0GVL5 298 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 A6NJ64 397 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 WWP2O00308 870 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ITGB1BP1O14713 200 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 GPAA1O43292 621 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 MGRN1O60291 552 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 PFKFB2O60825 505 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 GPX5O75715 221 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 SERPINA6P08185 405 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 GNAO1P09471 354 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 KRTAP1-4P0C5Y4 121 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 GFAPP14136 432 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 H2AFXP16104 143 aaPredicted RBP3.27□□□□□ -1.89
CCDC54-201ENST00000261058 STOMP27105 288 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 PSMB6P28072 239 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 GNA11P29992 359 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 SERPINB1P30740 379 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 IL2RGP31785 369 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 GTF2H1P32780 548 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 ACVR1BP36896 505 aa3.27□□□□□ -1.89
CCDC54-201ENST00000261058 CD79BP40259 229 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms