RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 APEX1P27695 318 aaKnown RBP8.86□□□□□ -0.99
VPS50-201ENST00000251739 GLRXP35754 106 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 DVL1P1P54792 670 aaPredicted RBP8.86□□□□□ -0.99
VPS50-201ENST00000251739 ELFN2Q5R3F8 820 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 ZNF813Q6ZN06 617 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 DEF8Q6ZN54 512 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 PXKQ7Z7A4 578 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 KRT73Q86Y46 540 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 ZNF584Q8IVC4 421 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 SPDL1Q96EA4 605 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 TXNDC15Q96J42 360 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 EPYCQ99645 322 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 EBF4Q9BQW3 602 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 SPATA5L1Q9BVQ7 753 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 EVA1AQ9H8M9 152 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 NKIRAS1Q9NYS0 192 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 MYEF2Q9P2K5 600 aaKnown RBP8.86□□□□□ -0.99
VPS50-201ENST00000251739 CMAHPQ9Y471 501 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 NOX1Q9Y5S8 564 aa8.86□□□□□ -0.99
VPS50-201ENST00000251739 PRORSD1PA6NEY8 169 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 VSTM5A8MXK1 200 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 M0R233 179 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 PLPP3O14495 311 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 POLR3GO15318 223 aaPredicted RBP8.85□□□□□ -0.99
VPS50-201ENST00000251739 ZNF500O60304 480 aaPredicted RBP8.85□□□□□ -0.99
VPS50-201ENST00000251739 RP2O75695 350 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 NCR1O76036 304 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 MFN2O95140 757 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 TGDSO95455 350 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 MT-ATP6P00846 226 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 HPXP02790 462 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 IFNGR1P15260 489 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 NQO1P15559 274 aaKnown RBP8.85□□□□□ -0.99
VPS50-201ENST00000251739 CBLP22681 906 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 CAPZA2P47755 286 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 GIPRP48546 466 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 CDH12P55289 794 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 MRPS11P82912 194 aaKnown RBP8.85□□□□□ -0.99
VPS50-201ENST00000251739 SCARB2Q14108 478 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 OR1Q1Q15612 314 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 NPTX1Q15818 432 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 CARD17Q5XLA6 110 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 DLEU7Q6UYE1 221 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 WDR88Q6ZMY6 472 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 TSPYL5Q86VY4 417 aaPredicted RBP8.85□□□□□ -0.99
VPS50-201ENST00000251739 LRP11Q86VZ4 500 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 MEX3DQ86XN8 651 aaKnown RBP8.85□□□□□ -0.99
VPS50-201ENST00000251739 PTOV1Q86YD1 416 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 BHLHE22Q8NFJ8 381 aaPredicted RBP8.85□□□□□ -0.99
VPS50-201ENST00000251739 TMEM54Q969K7 222 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 ARHGDIGQ99819 225 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 FOXB1Q99853 325 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 CPPED1Q9BRF8 314 aaPredicted RBP8.85□□□□□ -0.99
VPS50-201ENST00000251739 ZNF426Q9BUY5 554 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 ASPNQ9BXN1 380 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 ULBP2Q9BZM5 246 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 TPK1Q9H3S4 243 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 TMBIM4Q9HC24 238 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 B3GAT2Q9NPZ5 323 aa8.85□□□□□ -0.99
VPS50-201ENST00000251739 TMEFF2Q9UIK5 374 aaPredicted RBP8.85□□□□□ -0.99
VPS50-201ENST00000251739 SH3PXD2BA1X283 911 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 TCF21O43680 179 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 CHP2O43745 196 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 THY1P04216 161 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 C8BP07358 591 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 CD79AP11912 226 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 ACHEP22303 614 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 AQP1P29972 269 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 CSNK1A1P48729 337 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 ATP4BP51164 291 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 AQP5P55064 265 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 STX1BP61266 288 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 NCALDP61601 193 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 RPS23P62266 143 aaKnown RBP8.84□□□□□ -0.99
VPS50-201ENST00000251739 RAB1AP62820 205 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 IL1RL1Q01638 556 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 PMS2P3Q13401 168 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 CAMK2DQ13557 499 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 LIPNQ5VXI9 398 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 ZNF613Q6PF04 617 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 UGT2A3Q6UWM9 527 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 CARM1Q86X55 608 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 ARMC8Q8IUR7 673 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 HIPK4Q8NE63 616 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 SEMA6DQ8NFY4 1073 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 GPR32P1Q8NGA4 272 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 OR5J2Q8NH18 312 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 OR6X1Q8NH79 312 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 CLDND2Q8NHS1 167 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 FGFBP3Q8TAT2 258 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 ZNF607Q96SK3 696 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 CCDC28BQ9BUN5 200 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 MS4A5Q9H3V2 200 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 TMEM27Q9HBJ8 222 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 SLCO1B3Q9NPD5 702 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 CCDC167Q9P0B6 97 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 REV1Q9UBZ9 1251 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 FBXL3Q9UKT7 428 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 CORO2BQ9UQ03 480 aa8.84□□□□□ -0.99
VPS50-201ENST00000251739 ARHGAP32A7KAX9 2087 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms