RNA–Protein interactions for RNA: ENST00000229384.5

GATC-201, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-201ENST00000229384 PGA3P0DJD8 388 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 CD79AP11912 226 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 CAPZA2P47755 286 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 CSNK1A1P48729 337 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 LSM11P83369 360 aaKnown RBP eCLIP12.85□□□□□ -0.35
GATC-201ENST00000229384 RUNX1T1Q06455 604 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 SNTB2Q13425 540 aaKnown RBP12.85□□□□□ -0.35
GATC-201ENST00000229384 DAG1Q14118 895 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 KRT80Q6KB66 452 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 SNX32Q86XE0 403 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 ZNF584Q8IVC4 421 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 CDK20Q8IZL9 346 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 PFN4Q8NHR9 129 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 C10orf82Q8WW14 230 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 SLC25A44Q96H78 314 aaPredicted RBP12.85□□□□□ -0.35
GATC-201ENST00000229384 SEPHS2Q99611 448 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 SH3GL1Q99961 368 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 ECSITQ9BQ95 431 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 MRPL13Q9BYD1 178 aaKnown RBP12.85□□□□□ -0.35
GATC-201ENST00000229384 C20orf141Q9NUB4 165 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 GMPR2Q9P2T1 348 aaKnown RBP12.85□□□□□ -0.35
GATC-201ENST00000229384 SH3GLB1Q9Y371 365 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 FKBP7Q9Y680 259 aa12.85□□□□□ -0.35
GATC-201ENST00000229384 IGHV4-61A0A0C4DH41 118 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 LOC100653049A0A140TA62 436 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 LOC390937A0A1W2PQ73 354 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 BBIP1A8MTZ0 92 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 RNF13O43567 381 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 SHOX2O60902 331 aaPredicted RBP12.84□□□□□ -0.35
GATC-201ENST00000229384 KRT34O76011 436 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 MT-ND1P03886 318 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 TROVE2P10155 538 aaKnown RBP eCLIP12.84□□□□□ -0.35
GATC-201ENST00000229384 OR1E2P47887 323 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 GIPRP48546 466 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 RAB1AP62820 205 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 PIN1Q13526 163 aaPredicted RBP12.84□□□□□ -0.35
GATC-201ENST00000229384 MELKQ14680 651 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 FXNQ16595 210 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 HIST3H3Q16695 136 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 CYB5R2Q6BCY4 276 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 SPATA21Q7Z572 469 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 TMEM255BQ8WV15 326 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 LIPHQ8WWY8 451 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 CCDC134Q9H6E4 229 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 MYOZ1Q9NP98 299 aaPredicted RBP12.84□□□□□ -0.35
GATC-201ENST00000229384 TMEM38BQ9NVV0 291 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 TMEM160Q9NX00 188 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 RIMS3Q9UJD0 308 aa12.84□□□□□ -0.35
GATC-201ENST00000229384 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.84□□□□□ -0.354e-6■■■■□ 19.9
GATC-201ENST00000229384 FAM220BPB1ANY3 271 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 OR7A10O76100 309 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 OR5F1O95221 314 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 OR6A2O95222 327 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 STAMBPO95630 424 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 IGF2P01344 180 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 ZNF16P17020 682 aaPredicted RBP12.83□□□□□ -0.36
GATC-201ENST00000229384 GIFP27352 417 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 RBM34P42696 430 aaKnown RBP12.83□□□□□ -0.36
GATC-201ENST00000229384 PTDSS1P48651 473 aaKnown RBP12.83□□□□□ -0.36
GATC-201ENST00000229384 ZNF133P52736 654 aaPredicted RBP12.83□□□□□ -0.36
GATC-201ENST00000229384 GUCY1A3Q02108 690 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 RPL18Q07020 188 aaKnown RBP12.83□□□□□ -0.36
GATC-201ENST00000229384 GGTLC2Q14390 218 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 RAB39AQ14964 217 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 ERICH5Q6P6B1 374 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 CXXC5Q7LFL8 322 aaKnown RBP12.83□□□□□ -0.36
GATC-201ENST00000229384 PIWIL3Q7Z3Z3 882 aaKnown RBP12.83□□□□□ -0.36
GATC-201ENST00000229384 SLC22A24Q8N4F4 322 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 ZNF566Q969W8 418 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 MRPL24Q96A35 216 aaKnown RBP12.83□□□□□ -0.36
GATC-201ENST00000229384 NMD3Q96D46 503 aaKnown RBP12.83□□□□□ -0.36
GATC-201ENST00000229384 PIMREGQ9BSJ6 248 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 SOX7Q9BT81 388 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 MRPL37Q9BZE1 423 aaKnown RBP12.83□□□□□ -0.36
GATC-201ENST00000229384 BPESC1Q9GZL8 116 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 POLR2J2Q9GZM3 115 aaKnown RBP12.83□□□□□ -0.36
GATC-201ENST00000229384 RAB1BQ9H0U4 201 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 POLR2J3Q9H1A7 115 aaKnown RBP12.83□□□□□ -0.36
GATC-201ENST00000229384 DENND2DQ9H6A0 471 aaPredicted RBP12.83□□□□□ -0.36
GATC-201ENST00000229384 BAG5Q9UL15 447 aa12.83□□□□□ -0.36
GATC-201ENST00000229384 BLOC1S5-TXNDC5H3BN57 136 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 DHHO43323 396 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 UBL3O95164 117 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 ADRA2AP08913 450 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 QDPRP09417 244 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 FUT1P19526 365 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 KDELR2P33947 212 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 GLRXP35754 106 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 EVX1P49640 407 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 CHRFAM7AQ494W8 412 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 MMEL1Q495T6 779 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 CYBRD1Q53TN4 286 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 DEF8Q6ZN54 512 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 LRP11Q86VZ4 500 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 PAQR4Q8N4S7 273 aaPredicted RBP12.82□□□□□ -0.36
GATC-201ENST00000229384 ARIH2OSQ8N7S6 290 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 MOSPD2Q8NHP6 518 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 NEU4Q8WWR8 484 aaPredicted RBP12.82□□□□□ -0.36
GATC-201ENST00000229384 ASB10Q8WXI3 467 aa12.82□□□□□ -0.36
GATC-201ENST00000229384 MSI2Q96DH6 328 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms