RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 ST3GAL2Q16842 350 aa19.9■□□□□ 0.78
SMARCD2-201ENST00000225742 TMEM69Q5SWH9 247 aa19.9■□□□□ 0.78
SMARCD2-201ENST00000225742 MARCH3Q86UD3 253 aa19.9■□□□□ 0.78
SMARCD2-201ENST00000225742 KMT5CQ86Y97 462 aa19.9■□□□□ 0.78
SMARCD2-201ENST00000225742 ZNF676Q8N7Q3 588 aa19.9■□□□□ 0.78
SMARCD2-201ENST00000225742 OTOSQ8NHW6 89 aa19.9■□□□□ 0.78
SMARCD2-201ENST00000225742 C1orf216Q8TAB5 229 aa19.9■□□□□ 0.78
SMARCD2-201ENST00000225742 GIMAP1Q8WWP7 306 aa19.9■□□□□ 0.78
SMARCD2-201ENST00000225742 ORAI1Q96D31 301 aa19.9■□□□□ 0.78
SMARCD2-201ENST00000225742 OMA1Q96E52 524 aa19.9■□□□□ 0.78
SMARCD2-201ENST00000225742 ZFP64Q9NPA5 681 aa19.9■□□□□ 0.78
SMARCD2-201ENST00000225742 DIABLOQ9NR28 239 aa19.9■□□□□ 0.78
SMARCD2-201ENST00000225742 SMAD4Q13485 552 aaKnown RBP19.89■□□□□ 0.77
SMARCD2-201ENST00000225742 ZNF227Q86WZ6 799 aa19.89■□□□□ 0.77
SMARCD2-201ENST00000225742 ZNF441Q8N8Z8 693 aa19.89■□□□□ 0.77
SMARCD2-201ENST00000225742 SNAPC3Q92966 411 aa19.89■□□□□ 0.77
SMARCD2-201ENST00000225742 PHF7Q9BWX1 381 aaPredicted RBP19.89■□□□□ 0.77
SMARCD2-201ENST00000225742 RTN4RQ9BZR6 473 aa19.89■□□□□ 0.77
SMARCD2-201ENST00000225742 SYT4Q9H2B2 425 aa19.89■□□□□ 0.77
SMARCD2-201ENST00000225742 FBXL3Q9UKT7 428 aa19.89■□□□□ 0.77
SMARCD2-201ENST00000225742 RCE1Q9Y256 329 aa19.89■□□□□ 0.77
SMARCD2-201ENST00000225742 ANKRD20A5PA0PJZ0 165 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 ANXA2P2A6NMY6 339 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 H7C1C5 153 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 GPR171O14626 319 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 NUDT21O43809 227 aaKnown RBP19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 DUX1O43812 170 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 KHDRBS3O75525 346 aaKnown RBP19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 PIAS2O75928 621 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 IGHMP01871 453 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 ANXA2P07355 339 aaKnown RBP19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 ADRA2CP18825 462 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 HTR2BP41595 481 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 P2RX1P51575 399 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 OR1D5P58170 312 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 RPL27P61353 136 aaKnown RBP19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 LCN6P62502 163 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 ZP2Q05996 745 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 NSDHLQ15738 373 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 DNM1P46Q6ZS02 220 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 DPY19L4Q7Z388 723 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 STK35Q8TDR2 534 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 THEM6Q8WUY1 208 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 METTL21AQ8WXB1 218 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 C4orf45Q96LM5 186 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 VSX1Q9NZR4 365 aaPredicted RBP19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 DHCR7Q9UBM7 475 aaKnown RBP19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 B9D1Q9UPM9 204 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 NPTNQ9Y639 398 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 TTLL8A6PVC2 850 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 A8MVM7 634 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 MBTPS2O43462 519 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 NPIPB7O75200 414 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 DXOO77932 396 aaKnown RBP19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 MAGEB1P43366 347 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 SNRPD2P62316 118 aaKnown RBP19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 PRSS42Q7Z5A4 293 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 PM20D2Q8IYS1 436 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 ZNF519Q8TB69 540 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 SLC41A2Q96JW4 573 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 OR8B4Q96RC9 309 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 KLHDC3Q9BQ90 382 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 PTDSS2Q9BVG9 487 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 TXNIPQ9H3M7 391 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 STEAP1Q9UHE8 339 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 SCP2D1Q9UJQ7 156 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 MGAT4AQ9UM21 535 aa19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 MRPS17Q9Y2R5 130 aaKnown RBP19.88■□□□□ 0.77
SMARCD2-201ENST00000225742 TMED7-TICAM2A0A0A6YYA0 188 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 A0A1B0GUH1 482 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 PRSS37A4D1T9 235 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 SOX2P48431 317 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 DMWDQ09019 674 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 METTL11BQ5VVY1 283 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 GRINAQ7Z429 371 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 MISPQ8IVT2 679 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 PLPP5Q8NEB5 264 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 OR6S1Q8NH40 331 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 MCHR2Q969V1 340 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 MED30Q96HR3 178 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 RADILQ96JH8 1075 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 UTP23Q9BRU9 249 aaKnown RBP19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 TMED7Q9Y3B3 224 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 PCDH15Q96QU1 1955 aa19.87■□□□□ 0.77
SMARCD2-201ENST00000225742 A0A1B0GX78 115 aa19.86■□□□□ 0.77
SMARCD2-201ENST00000225742 SSNA1O43805 119 aa19.86■□□□□ 0.77
SMARCD2-201ENST00000225742 SUSD5O60279 629 aa19.86■□□□□ 0.77
SMARCD2-201ENST00000225742 FADS1O60427 444 aa19.86■□□□□ 0.77
SMARCD2-201ENST00000225742 NUDT14O95848 222 aa19.86■□□□□ 0.77
SMARCD2-201ENST00000225742 CDK2P24941 298 aa19.86■□□□□ 0.77
SMARCD2-201ENST00000225742 CLDN12P56749 244 aa19.86■□□□□ 0.77
SMARCD2-201ENST00000225742 TAS2R20P59543 309 aa19.86■□□□□ 0.77
SMARCD2-201ENST00000225742 GPLD1P80108 840 aa19.86■□□□□ 0.77
SMARCD2-201ENST00000225742 SLC17A1Q14916 467 aa19.86■□□□□ 0.77
SMARCD2-201ENST00000225742 TOMM34Q15785 309 aaPredicted RBP19.86■□□□□ 0.77
SMARCD2-201ENST00000225742 ARHGAP40Q5TG30 622 aa19.86■□□□□ 0.77
SMARCD2-201ENST00000225742 SLC18B1Q6NT16 456 aa19.86■□□□□ 0.77
SMARCD2-201ENST00000225742 PRSS35Q8N3Z0 413 aa19.86■□□□□ 0.77
SMARCD2-201ENST00000225742 OR11G2Q8NGC1 345 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms