RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 RP1P56715 2156 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 TRAV36DV7A0A075B6V5 113 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 TMED7-TICAM2A0A0A6YYA0 188 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 OGG1O15527 345 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 GPR3P46089 330 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 FNTBP49356 437 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 HSD11B2P80365 405 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 OR7A5Q15622 319 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 ZNF485Q8NCK3 441 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 OR11A1Q9GZK7 315 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 SCP2D1Q9UJQ7 156 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 TMED7Q9Y3B3 224 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 CYB5AP00167 134 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 IL9P15248 144 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 CD27P26842 260 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 KLHL26Q53HC5 615 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 NDUFAF7Q7L592 441 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 ZNF101Q8IZC7 436 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 ZNF321PQ8N8H1 164 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 PLPP7Q8NBV4 271 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 SLC25A44Q96H78 314 aaPredicted RBP13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 NARS2Q96I59 477 aaKnown RBP13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 HRASLSQ9HDD0 168 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 MED11Q9P086 117 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 MMACHCQ9Y4U1 282 aa13.61□□□□□ -0.23
UBE2D4-201ENST00000222402 SPOCK1Q08629 439 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 PRTGQ2VWP7 1150 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 HAVCR2Q8TDQ0 301 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 C17orf50Q8WW18 174 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 MSANTD3Q96H12 275 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 NKX3-1Q99801 234 aaPredicted RBP13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 ARL6Q9H0F7 186 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 ZNF576Q9H609 170 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 SDHAF3Q9NRP4 125 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 FGF21Q9NSA1 209 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 H0YC42 278 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 ARPC5O15511 151 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 OIP5O43482 229 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 OR2T1O43869 369 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 MYF5P13349 255 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 ANXA7P20073 488 aaKnown RBP13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 DCAF7P61962 342 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 GPLD1P80108 840 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 TLE3Q04726 772 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 ELAVL1Q15717 326 aaKnown RBP13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 ACKR1Q16570 336 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 GLB1L2Q8IW92 636 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 OR2AJ1Q8NGZ0 328 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 CCDC107Q8WV48 283 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 CDCP1Q9H5V8 836 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 PLEKHA1Q9HB21 404 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 TAS2R8Q9NYW2 309 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 A0A1W2PPL8 197 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 METTL21EPA6NDL7 271 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 C4orf47A7E2U8 309 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 H0YIG0 161 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 DCTDP32321 178 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 C14orf28Q4W4Y0 310 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 OR2G2Q8NGZ5 317 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 JAM3Q9BX67 310 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 SEMA4CQ9C0C4 833 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 IFT46Q9NQC8 304 aa13.6□□□□□ -0.23
UBE2D4-201ENST00000222402 IL33O95760 270 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 HSD11B1P28845 292 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 POU3F4P49335 361 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 ZNF41P51814 821 aaPredicted RBP13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 TAS2R20P59543 309 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 DDOQ99489 341 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 KCNJ15Q99712 375 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 SLC22A13Q9Y226 551 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 NOP16Q9Y3C1 178 aaKnown RBP13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 ZSCAN5BA6NJL1 495 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 CRABP1P29762 137 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 DHPSP49366 369 aaPredicted RBP13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 DYRK1AQ13627 763 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 LRRC37A5PQ49AS3 106 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 UBL7Q96S82 380 aaPredicted RBP13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 S100A13Q99584 98 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 POTEKPQ9BYX7 375 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 SERINC1Q9NRX5 453 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 DOCK8Q8NF50 2099 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 AMY2AP04746 511 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 ZNF20P17024 532 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 OR3A3P47888 321 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 STARP49675 285 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 AGFG1P52594 562 aaKnown RBP13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 POU3F1Q03052 451 aaPredicted RBP13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 IL10RAQ13651 578 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 ATXN7L3Q14CW9 347 aaPredicted RBP13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 FAM69BQ5VUD6 431 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 CARD17Q5XLA6 110 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 LINC00346Q8IVM7 164 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 OR6V1Q8N148 313 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 FAM109AQ8N4B1 249 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 COQ8AQ8NI60 647 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 FGF11Q92914 225 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 TAAR8Q969N4 342 aa13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 JSRP1Q96MG2 331 aaPredicted RBP13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 ZMAT3Q9HA38 289 aaKnown RBP13.59□□□□□ -0.23
UBE2D4-201ENST00000222402 SLC23A1Q9UHI7 598 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms