RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 SHC2P98077 582 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 OR1Q1Q15612 314 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 PRSS36Q5K4E3 855 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 ATPAF1Q5TC12 328 aaPredicted RBP9.66□□□□□ -0.86
VCL-201ENST00000211998 OR7E24Q6IFN5 339 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 BRICD5Q6PL45 260 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 CPXM2Q8N436 756 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 SIGLECL1Q8N7X8 197 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 MDGA1Q8NFP4 955 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 GABARAPL3Q9BY60 117 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 ZNF586Q9NXT0 402 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 GON4LQ3T8J9 2241 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.66□□□□□ -0.86
VCL-201ENST00000211998 RFPL4AA6NLU0 287 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 TMEM212A6NML5 194 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 RFPL4AL1F8VTS6 287 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 HOXC13P31276 330 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 PTTG1IPP53801 180 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 RPP30P78346 268 aaKnown RBP9.66□□□□□ -0.86
VCL-201ENST00000211998 GLO1Q04760 184 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 DSC1Q08554 894 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 MLC1Q15049 377 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 NSDHLQ15738 373 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 OR8U1Q8NH10 309 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 SLC38A5Q8WUX1 472 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 FAM3DQ96BQ1 224 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 MEGF10Q96KG7 1140 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 CSF3RQ99062 836 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 DUSP22Q9NRW4 184 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 ZNF443Q9Y2A4 671 aaPredicted RBP9.66□□□□□ -0.86
VCL-201ENST00000211998 PRAMEF26H0Y7S4 382 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 FABP5Q01469 135 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 TAZQ16635 292 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 CLLU1OSQ5K130 101 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 FAM69BQ5VUD6 431 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 SHEQ5VZ18 495 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 OR52B4Q8NGK2 314 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 PEX11GQ96HA9 241 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 ENKD1Q9H0I2 346 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 EVA1AQ9H8M9 152 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 VSX1Q9NZR4 365 aaPredicted RBP9.66□□□□□ -0.86
VCL-201ENST00000211998 CHRNA9Q9UGM1 479 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 DNAJC25-GNG10A0A024R161 153 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 A0A087WV62 115 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 TMEM269A0A1B0GVZ9 245 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 CD37P11049 281 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 MTHFD2P13995 350 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 ZNF25P17030 456 aaPredicted RBP9.66□□□□□ -0.86
VCL-201ENST00000211998 MAKP20794 623 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 SLC6A8P48029 635 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 ARHGAP19Q14CB8 494 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 IQCJQ1A5X6 159 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 GGNBP1Q5YKI7 109 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 ESPNLQ6ZVH7 1005 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 OR1J1Q8NGS3 322 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 TMEM40Q8WWA1 233 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 SELENOIQ9C0D9 397 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 AK3Q9UIJ7 227 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 V9GYS6 101 aa9.66□□□□□ -0.86
VCL-201ENST00000211998 MLF1P58340 268 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 HLXQ14774 488 aaPredicted RBP9.65□□□□□ -0.86
VCL-201ENST00000211998 COX20Q5RI15 118 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 LYPD8Q6UX82 237 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.65□□□□□ -0.863e-7■■■■□ 23.7
VCL-201ENST00000211998 TMEM179BQ7Z7N9 219 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 ADIPOR2Q86V24 386 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 C15orf54Q8N8G6 183 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 CDRT4Q8N9R6 151 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 CHST14Q8NCH0 376 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 THAP3Q8WTV1 239 aaPredicted RBP9.65□□□□□ -0.86
VCL-201ENST00000211998 DIO2Q92813 273 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 DAZAP1Q96EP5 407 aaKnown RBP9.65□□□□□ -0.86
VCL-201ENST00000211998 MYADMQ96S97 322 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 NXF5Q9H1B4 397 aaKnown RBP9.65□□□□□ -0.86
VCL-201ENST00000211998 LOC100289279A0A1B0GTE1 492 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 A6NIZ1 184 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 NUDT21O43809 227 aaKnown RBP9.65□□□□□ -0.86
VCL-201ENST00000211998 RRASP10301 218 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 FPR3P25089 353 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 RAP1BP61224 184 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 OVCH1Q7RTY7 1134 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 ABHD12BQ7Z5M8 362 aaPredicted RBP9.65□□□□□ -0.86
VCL-201ENST00000211998 CPEB2Q7Z5Q1 589 aaKnown RBP9.65□□□□□ -0.86
VCL-201ENST00000211998 TMEM123Q8N131 208 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 NUDT8Q8WV74 236 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 LRFN5Q96NI6 719 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 CPEB1Q9BZB8 566 aaKnown RBP9.65□□□□□ -0.86
VCL-201ENST00000211998 ZNF286AQ9HBT8 521 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 KLHL42Q9P2K6 505 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 CD207Q9UJ71 328 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 PRAMEF27A3QJZ7 478 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 SGK494L7N484 410 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 M0R143 59 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 CNMDO75829 334 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 IRF2P14316 349 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 VASPP50552 380 aaPredicted RBP9.65□□□□□ -0.86
VCL-201ENST00000211998 KIR2DS3Q14952 304 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 CTSL3PQ5NE16 218 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 PRAMEF9Q5VWM5 478 aa9.65□□□□□ -0.86
VCL-201ENST00000211998 OR2G2Q8NGZ5 317 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms