RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 NOX3Q9HBY0 568 aa12.05□□□□□ -0.48
LINC00339-211ENST00000641009 TRIM33Q9UPN9 1127 aa12.05□□□□□ -0.48
LINC00339-211ENST00000641009 A0A0G2JND7 137 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 LOC390937A0A1W2PQ73 354 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 ZNF726A6NNF4 738 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 NDUFS8O00217 210 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 CHP2O43745 196 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 FMO6PO60774 539 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 EDF1O60869 148 aaKnown RBP12.04□□□□□ -0.48
LINC00339-211ENST00000641009 LYPD3O95274 346 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 IFNA2P01563 188 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 ADORA3P0DMS8 318 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 CD79AP11912 226 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 B4GALT1P15291 398 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 NPR2P20594 1047 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 PPOXP50336 477 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 PIGFQ07326 219 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 SNTB2Q13425 540 aaKnown RBP12.04□□□□□ -0.48
LINC00339-211ENST00000641009 KRT80Q6KB66 452 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 ZNF813Q6ZN06 617 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 HDXQ7Z353 690 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 SPATA21Q7Z572 469 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 PXKQ7Z7A4 578 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 CCDC36Q8IYA8 594 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 OR6N1Q8NGY5 312 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 OR5J2Q8NH18 312 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 OR10A6Q8NH74 314 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 ADAMTS16Q8TE57 1224 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 ULBP2Q9BZM5 246 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 B3GAT2Q9NPZ5 323 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 B3GNT2Q9NY97 397 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 CDC42EP3Q9UKI2 254 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 USP22Q9UPT9 525 aa12.04□□□□□ -0.48
LINC00339-211ENST00000641009 IGHV4-61A0A0C4DH41 118 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 TMEM129A0AVI4 362 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 SH3PXD2BA1X283 911 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 KPNA4O00629 521 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-211ENST00000641009 MT-ATP6P00846 226 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 C8BP07358 591 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 FAM157CP0CG43 387 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 IFNGR1P15260 489 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 CD247P20963 164 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 PCGF2P35227 344 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 BIDP55957 195 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 DAG1Q14118 895 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 GSG1Q2KHT4 349 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 ARIH2OSQ8N7S6 290 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 SPATA3Q8NHX4 192 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 TAMM41Q96BW9 452 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 DOK1Q99704 481 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 FOXB1Q99853 325 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 RAB1BQ9H0U4 201 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 ZNF224Q9NZL3 707 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 SLC7A7Q9UM01 511 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 POFUT2Q9Y2G5 429 aa12.03□□□□□ -0.48
LINC00339-211ENST00000641009 FBP2O00757 339 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 OR6A2O95222 327 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 CH25HO95992 272 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 APEHP13798 732 aaKnown RBP12.02□□□□□ -0.48
LINC00339-211ENST00000641009 ZNF14P17017 642 aaPredicted RBP12.02□□□□□ -0.48
LINC00339-211ENST00000641009 CSNK1A1P48729 337 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 CRYBA2P53672 197 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 ZNF74Q16587 644 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 TTC33Q6PID6 262 aaPredicted RBP12.02□□□□□ -0.48
LINC00339-211ENST00000641009 ZNF627Q7L945 461 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 PATL1Q86TB9 770 aaKnown RBP12.02□□□□□ -0.48
LINC00339-211ENST00000641009 CDK20Q8IZL9 346 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 LRRC17Q8N6Y2 441 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 IL17RDQ8NFM7 739 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 SLC26A7Q8TE54 656 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 TSPEARQ8WU66 669 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 ZNF75AQ96N20 296 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 BEX2Q9BXY8 128 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 BPESC1Q9GZL8 116 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 MYOZ1Q9NP98 299 aaPredicted RBP12.02□□□□□ -0.48
LINC00339-211ENST00000641009 TMEM160Q9NX00 188 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 TAS2R5Q9NYW4 299 aa12.02□□□□□ -0.48
LINC00339-211ENST00000641009 TRAPPC13A5PLN9 417 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 RNF212BA8MTL3 300 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 VSTM5A8MXK1 200 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 LMX1BO60663 402 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 IGFBP1P08833 259 aaPredicted RBP12.02□□□□□ -0.49
LINC00339-211ENST00000641009 DAOP14920 347 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 NR4A1P22736 598 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 PTDSS1P48651 473 aaKnown RBP12.02□□□□□ -0.49
LINC00339-211ENST00000641009 GZMKP49863 264 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 GZMMP51124 257 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 MELKQ14680 651 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 MSMPQ1L6U9 139 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 VMACQ2NL98 169 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 IQCCQ4KMZ1 466 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 IL17RELQ6ZVW7 336 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 SLC35D2Q76EJ3 337 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 SLC30A8Q8IWU4 369 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 MSI2Q96DH6 328 aaKnown RBP12.02□□□□□ -0.49
LINC00339-211ENST00000641009 VIPAS39Q9H9C1 493 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 CHODLQ9H9P2 273 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 DYNLRB1Q9NP97 96 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 NANSQ9NR45 359 aa12.02□□□□□ -0.49
LINC00339-211ENST00000641009 LOC100289279A0A1B0GTE1 492 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms