RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 SCGB1C1Q8TD33 95 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 NANOS1Q8WY41 292 aaKnown RBP13.18□□□□□ -0.3
SCARB2-208ENST00000638372 ACOXLQ9NUZ1 547 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 SNAPC5O75971 98 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 APLNRP35414 380 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 CASP3P42574 277 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 CAV2P51636 162 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 EPHA4P54764 986 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 TCTN1Q2MV58 587 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 ZNF767PQ75MW2 155 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 ZNF709Q8N972 641 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 ZSCAN1Q8NBB4 408 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 GIMAP1Q8WWP7 306 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 CDCA4Q9BXL8 241 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 METTL17Q9H7H0 456 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-208ENST00000638372 PRDM7Q9NQW5 492 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 CMC2Q9NRP2 79 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 COA3Q9Y2R0 106 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-208ENST00000638372 SPTY2D1-AS1A0A0U1RR47 76 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 RFPL3O75679 317 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 GAAP10253 952 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 HOXB3P14651 431 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-208ENST00000638372 PSMB1P20618 241 aaKnown RBP13.18□□□□□ -0.3
SCARB2-208ENST00000638372 HTR2CP28335 458 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 MEX3BQ6ZN04 569 aaKnown RBP13.18□□□□□ -0.3
SCARB2-208ENST00000638372 VASH1Q7L8A9 365 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-208ENST00000638372 HSD17B8Q92506 261 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 FOXRED1Q96CU9 486 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-208ENST00000638372 PRRT1Q99946 306 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 C7orf50Q9BRJ6 194 aaKnown RBP13.18□□□□□ -0.3
SCARB2-208ENST00000638372 SELENOIQ9C0D9 397 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 TMEFF2Q9UIK5 374 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-208ENST00000638372 BOKQ9UMX3 212 aaPredicted RBP13.18□□□□□ -0.3
SCARB2-208ENST00000638372 UBL3O95164 117 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 ADH6P28332 368 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 DRD3P35462 400 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 AGERQ15109 404 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 PRSS45Q7RTY3 260 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 GRINAQ7Z429 371 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 SPRED2Q7Z698 418 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 SGPP2Q8IWX5 399 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 LIN7BQ9HAP6 207 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 ENY2Q9NPA8 101 aa13.18□□□□□ -0.3
SCARB2-208ENST00000638372 OR7C1O76099 320 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-208ENST00000638372 ICAM2P13598 275 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 CCR5P51681 352 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 TAS2R19P59542 299 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 TIAL1Q01085 375 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCARB2-208ENST00000638372 RPS19BP1Q86WX3 136 aaKnown RBP13.17□□□□□ -0.3
SCARB2-208ENST00000638372 GTPBP8Q8N3Z3 284 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-208ENST00000638372 C12orf45Q8N5I9 185 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-208ENST00000638372 OR56B4Q8NH76 319 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 DCUN1D4Q92564 292 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 ZBTB8AQ96BR9 441 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 SORCS2Q96PQ0 1159 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 YBX2Q9Y2T7 364 aaKnown RBP13.17□□□□□ -0.3
SCARB2-208ENST00000638372 NRG2O14511 850 aaPredicted RBP13.17□□□□□ -0.3
SCARB2-208ENST00000638372 HLA-AP01891 365 aaKnown RBP13.17□□□□□ -0.3
SCARB2-208ENST00000638372 IFNGR1P15260 489 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 MRPL19P49406 292 aaKnown RBP13.17□□□□□ -0.3
SCARB2-208ENST00000638372 TGFBR3Q03167 851 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 GLYATL3Q5SZD4 288 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 C5orf46Q6UWT4 87 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 DCXRQ7Z4W1 244 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 IL1F10Q8WWZ1 152 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 ZG16BQ96DA0 208 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 EIF5A2Q9GZV4 153 aaKnown RBP13.17□□□□□ -0.3
SCARB2-208ENST00000638372 CHST2Q9Y4C5 530 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 PCDHGA1Q9Y5H4 931 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 A0A0A6YYD5 115 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 ZNF44P15621 663 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 AQP6Q13520 282 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 UBE2NLQ5JXB2 153 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 PLCXD3Q63HM9 321 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 OR4N2Q8NGD1 307 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 OR6F1Q8NGZ6 308 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 SEMA4CQ9C0C4 833 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 FAM86C1Q9NVL1 165 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 KCNIP1Q9NZI2 227 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 KLHL13Q9P2N7 655 aa13.17□□□□□ -0.3
SCARB2-208ENST00000638372 KCNE1BA0A087WTH5 132 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 PRAMEF25A6NGN4 478 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 TP53P04637 393 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-208ENST00000638372 PIPP12273 146 aaPredicted RBP13.16□□□□□ -0.3
SCARB2-208ENST00000638372 SRMP19623 302 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 HTR2AP28223 471 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 TGM4P49221 684 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 GPR85P60893 370 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 CAMKMTQ7Z624 323 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 LACC1Q8IV20 430 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 FGGYQ96C11 551 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 OCEL1Q9H607 264 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 LOC102725191A0A1B0GVB3 256 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 CTSVO60911 334 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 PPICP45877 212 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 MECP2P51608 486 aaKnown RBP13.16□□□□□ -0.3
SCARB2-208ENST00000638372 CCR6P51684 374 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 MTCP1P56278 107 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 MFAP5Q13361 173 aa13.16□□□□□ -0.3
SCARB2-208ENST00000638372 BEX5Q5H9J7 111 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms