RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 CD80P33681 288 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 RBMXP38159 391 aaKnown RBP15.3■□□□□ 0.04
CLN6-212ENST00000636020 SLC6A9P48067 706 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 ERVS71-1P61550 626 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 CKAP4Q07065 602 aaKnown RBP15.3■□□□□ 0.04
CLN6-212ENST00000636020 SLC3A1Q07837 685 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 C1DQ13901 141 aaKnown RBP15.3■□□□□ 0.04
CLN6-212ENST00000636020 MFSD13AQ14CX5 517 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 CHI3L2Q15782 390 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 FAM209AQ5JX71 171 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 MRPL2Q5T653 305 aaKnown RBP15.3■□□□□ 0.04
CLN6-212ENST00000636020 DDIASQ8IXT1 998 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 PAQR4Q8N4S7 273 aaPredicted RBP15.3■□□□□ 0.04
CLN6-212ENST00000636020 STK35Q8TDR2 534 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 C11orf40Q8WZ69 217 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 PPP3R2Q96LZ3 170 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 PTDSS2Q9BVG9 487 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 SLC38A1Q9H2H9 487 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 NPHS2Q9NP85 383 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 DCDC2Q9UHG0 476 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 POFUT2Q9Y2G5 429 aa15.3■□□□□ 0.04
CLN6-212ENST00000636020 BIRC6Q9NR09 4857 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 DNAH9Q9NYC9 4486 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 FZD7O75084 574 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 UBL3O95164 117 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 PROCP04070 461 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 GKN3PP0CG01 181 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 PPIAL4GP0DN37 164 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 B4GALT1P15291 398 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 RPS4Y1P22090 263 aaKnown RBP15.29■□□□□ 0.04
CLN6-212ENST00000636020 ACAA2P42765 397 aaKnown RBP15.29■□□□□ 0.04
CLN6-212ENST00000636020 SEC61A1P61619 476 aaKnown RBP15.29■□□□□ 0.04
CLN6-212ENST00000636020 HPCAP84074 193 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 PDCD1Q15116 288 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 MOGQ16653 247 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 DEFB112Q30KQ8 113 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 UGT3A2Q3SY77 523 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 WBP2NLQ6ICG8 309 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 ZCCHC23Q6ZST2 131 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 RNF130Q86XS8 419 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 ZNF440Q8IYI8 595 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 CADM2Q8N3J6 435 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 FGFBP3Q8TAT2 258 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 LRR1Q96L50 414 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 C1orf50Q9BV19 199 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 PATZ1Q9HBE1 687 aaKnown RBP15.29■□□□□ 0.04
CLN6-212ENST00000636020 TCF7L1Q9HCS4 588 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 TNFRSF19Q9NS68 423 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 RLIMQ9NVW2 624 aa15.29■□□□□ 0.04
CLN6-212ENST00000636020 A0A087WUV0 522 aaPredicted RBP15.28■□□□□ 0.04
CLN6-212ENST00000636020 A0A096LPI6 279 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 LOC102725191A0A1B0GVB3 256 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 EXOC1LA0A1B0GW35 172 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 A8MXK9 166 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 AKAP8O43823 692 aaKnown RBP15.28■□□□□ 0.04
CLN6-212ENST00000636020 IGHV2-70P01814 119 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 MT-ND5P03915 603 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 SBK2P0C263 348 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 PATE4P0C8F1 98 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 OR8G3PP0DMU2 310 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 IL7RP16871 459 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 PROK1P58294 105 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 CAMK2DQ13557 499 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 GNA13Q14344 377 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 FAM189A2Q15884 450 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 PGS1Q32NB8 556 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 SAMD5Q5TGI4 173 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 IL23RQ5VWK5 629 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 CARD17Q5XLA6 110 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 FAM205BPQ63HN1 556 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 OR4F3Q6IEY1 312 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 ANKFN1Q8N957 763 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 NOA1Q8NC60 698 aaKnown RBP15.28■□□□□ 0.04
CLN6-212ENST00000636020 LINC01006Q8NI28 216 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 TWIST2Q8WVJ9 160 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 ZDHHC16Q969W1 377 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 UPRTQ96BW1 309 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 TRNT1Q96Q11 434 aaKnown RBP15.28■□□□□ 0.04
CLN6-212ENST00000636020 SLC30A2Q9BRI3 323 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 CHIAQ9BZP6 476 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 OR51B6Q9H340 312 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 MTHFD2LQ9H903 347 aaPredicted RBP15.28■□□□□ 0.04
CLN6-212ENST00000636020 SLC6A13Q9NSD5 602 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 ASH2LQ9UBL3 628 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 EGFL7Q9UHF1 273 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 NPTNQ9Y639 398 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 COL7A1Q02388 2944 aa15.28■□□□□ 0.04
CLN6-212ENST00000636020 C5orf63A6NC05 138 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 HMGN4O00479 90 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 RNASET2O00584 256 aaKnown RBP15.27■□□□□ 0.04
CLN6-212ENST00000636020 TM9SF1O15321 606 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 IGHV1-46P01743 117 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 IGHV3-13P01766 116 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 LCKP06239 509 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 UQCRC2P22695 453 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 RPS5P46782 204 aaKnown RBP15.27■□□□□ 0.04
CLN6-212ENST00000636020 ZNF81P51508 661 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 GLO1Q04760 184 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 EGR4Q05215 589 aa15.27■□□□□ 0.04
CLN6-212ENST00000636020 RBBP4Q09028 425 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms