RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 RANBP10Q6VN20 620 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 GDPGP1Q6ZNW5 385 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 RNF113BQ8IZP6 322 aaKnown RBP5.15□□□□□ -1.58
SCN1A-209ENST00000635750 CLECL1Q8IZS7 167 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 CHST14Q8NCH0 376 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 LINC01599Q8WXQ3 324 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 PRDM9Q9NQV7 894 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 AIG1Q9NVV5 245 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 BABAM2Q9NXR7 383 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 DFFBO76075 338 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 CRYAAP02489 173 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 F11P03951 625 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 THBS1P07996 1170 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 CSNK1EP49674 416 aaKnown RBP5.15□□□□□ -1.58
SCN1A-209ENST00000635750 VEGFBP49765 207 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 PPIAP62937 165 aaKnown RBP5.15□□□□□ -1.58
SCN1A-209ENST00000635750 PIGFQ07326 219 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 GAB1Q13480 694 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 NKAIN2Q5VXU1 208 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 OR8G2PQ6IF36 304 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 ZNF813Q6ZN06 617 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 CCDC71Q8IV32 467 aaPredicted RBP5.15□□□□□ -1.58
SCN1A-209ENST00000635750 FOXN4Q96NZ1 517 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 CTRCQ99895 268 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 TMPRSS5Q9H3S3 457 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 MOB1AQ9H8S9 216 aa5.15□□□□□ -1.58
SCN1A-209ENST00000635750 A0A0B4J203 849 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 FBXO24O75426 580 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 TSPAN12O95859 305 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 CTXN2P0C2S0 81 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 SLURP2P0DP57 97 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 EIF2DP41214 584 aaKnown RBP5.15□□□□□ -1.59
SCN1A-209ENST00000635750 SMAD2Q15796 467 aaKnown RBP5.15□□□□□ -1.59
SCN1A-209ENST00000635750 DEFB109BQ30KR1 87 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 UNC50Q53HI1 259 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 LRRC10Q5BKY1 277 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 LRRC28Q86X40 367 aaPredicted RBP5.15□□□□□ -1.59
SCN1A-209ENST00000635750 VN1R2Q8NFZ6 395 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 OR2M3Q8NG83 312 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 OR7G3Q8NG95 312 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 OR2AE1Q8NHA4 323 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 RLN3Q8WXF3 142 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 ADAMTS14Q8WXS8 1223 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 MENTQ9BUN1 341 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF346Q9UL40 294 aaKnown RBP5.15□□□□□ -1.59
SCN1A-209ENST00000635750 NDRG4Q9ULP0 352 aaKnown RBP5.15□□□□□ -1.59
SCN1A-209ENST00000635750 K7ERQ8 282 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 ARPC1BO15143 372 aaKnown RBP5.15□□□□□ -1.59
SCN1A-209ENST00000635750 DOK2O60496 412 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 C1orf105O95561 183 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 HPNP05981 417 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 PRKACAP17612 351 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 PSAPL1Q6NUJ1 521 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 C6orf89Q6UWU4 347 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 CA5BP1Q8WTZ4 195 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 MOB3AQ96BX8 217 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 APIPQ96GX9 242 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 BCL7BQ9BQE9 202 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 AAMDCQ9H7C9 122 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 MRPS28Q9Y2Q9 187 aaKnown RBP5.15□□□□□ -1.59
SCN1A-209ENST00000635750 MMACHCQ9Y4U1 282 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 TLCD2A6NGC4 264 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 MAGEB4O15481 346 aaPredicted RBP5.15□□□□□ -1.59
SCN1A-209ENST00000635750 TBX10O75333 385 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 GPR32O75388 356 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 UTS2O95399 124 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 FBP1P09467 338 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 OR5G3P0C626 314 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 ATXN1LP0C7T5 689 aaKnown RBP5.15□□□□□ -1.59
SCN1A-209ENST00000635750 MYF6P23409 242 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 FOXC1Q12948 553 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 TUSC1Q2TAM9 212 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 SLC22A24Q8N4F4 322 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 RBM14Q96PK6 669 aaKnown RBP5.15□□□□□ -1.59
SCN1A-209ENST00000635750 OR51J1Q9H342 316 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 WDR76Q9H967 626 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 CLCF1Q9UBD9 225 aa5.15□□□□□ -1.59
SCN1A-209ENST00000635750 VIRMAQ69YN4 1812 aaKnown RBP5.15□□□□□ -1.59
SCN1A-209ENST00000635750 TRAV36DV7A0A075B6V5 113 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 DBX1A6NMT0 343 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 ADAM10O14672 748 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 ZNF623O75123 536 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 CSF3P09919 207 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 LIPCP11150 499 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 LAMP1P11279 417 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 DLX5P56178 289 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 PPP1CAP62136 330 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 SNRPD2P62316 118 aaKnown RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 PIN1Q13526 163 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 FGFBP1Q14512 234 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 CCBE1Q6UXH8 406 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 C17orf78Q8N4C9 275 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 EDEM2Q9BV94 578 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 MFRPQ9BY79 579 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 ZDHHC5Q9C0B5 715 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 SEMA4GQ9NTN9 838 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 USP22Q9UPT9 525 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 WTIPA6NIX2 430 aaPredicted RBP5.14□□□□□ -1.59
SCN1A-209ENST00000635750 HPGDSO60760 199 aa5.14□□□□□ -1.59
SCN1A-209ENST00000635750 NOVA1P51513 510 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms