RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 UNC119Q13432 240 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 DMC1Q14565 340 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 NSDHLQ15738 373 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF77Q15935 545 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 PRR4Q16378 134 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 SYPL1Q16563 259 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 AANATQ16613 207 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 IMMTQ16891 758 aaKnown RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 KCTD19Q17RG1 926 aaPredicted RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 LRRC36Q1X8D7 754 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF630Q2M218 657 aaPredicted RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 CFAP221Q4G0U5 840 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 TOR1AIP1Q5JTV8 583 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 EOGTQ5NDL2 527 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 RABGAP1LQ5R372 815 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 TPRG1LQ5T0D9 272 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 DCST2Q5T1A1 773 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 ARMC12Q5T9G4 340 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 HES3Q5TGS1 186 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 METTL11BQ5VVY1 283 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 KCTD16Q68DU8 428 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 SPOPLQ6IQ16 392 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 ZSCAN25Q6NSZ9 544 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 FAM173BQ6P4H8 233 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 KCNIP4Q6PIL6 250 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 BLOC1S2Q6QNY1 142 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 IGFL2Q6UWQ7 119 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 LRRC31Q6UY01 552 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 NCCRP1Q6ZVX7 275 aaPredicted RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 PAQR9Q6ZVX9 377 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 CYS1Q717R9 158 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 CENPUQ71F23 418 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 APTXQ7Z2E3 356 aaKnown RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF571Q7Z3V5 609 aaPredicted RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 TMEM150AQ86TG1 271 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 VRK2Q86Y07 508 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 CCDC65Q8IXS2 484 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 DAW1Q8N136 415 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 ZNF786Q8N393 782 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 ARIH2OSQ8N7S6 290 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 ATP6V0D2Q8N8Y2 350 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 CNNM3Q8NE01 707 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 CCDC54Q8NEL0 328 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 ANKRD20A12PQ8NF67 263 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 TSTD1Q8NFU3 115 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 OR2A12Q8NGT7 310 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 OR9A4Q8NGU2 314 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 FANK1Q8TC84 345 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 PHOSPHO2Q8TCD6 241 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 HTR3CQ8WXA8 447 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 FAM3CQ92520 227 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 RAPGEF5Q92565 580 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 NDRG1Q92597 394 aaKnown RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 ESR2Q92731 530 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 RDH5Q92781 318 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 KLK6Q92876 244 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 NCLNQ969V3 563 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 MYLPFQ96A32 169 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 AKR1E2Q96JD6 320 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 MBOAT7Q96N66 472 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 TMEM237Q96Q45 408 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 VPS35Q96QK1 796 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 CYP2S1Q96SQ9 504 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 HDHD3Q9BSH5 251 aaPredicted RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 TMEM121Q9BTD3 319 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 NAT9Q9BTE0 207 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 WRAP53Q9BUR4 548 aaKnown RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 SPZ1Q9BXG8 430 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 CHIAQ9BZP6 476 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 NMNAT2Q9BZQ4 307 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 KRT23Q9C075 422 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 CCSER1Q9C0I3 900 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 NT5C3AQ9H0P0 336 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 NXF5Q9H1B4 397 aaKnown RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 SLC25A51Q9H1U9 297 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 RSPH9Q9H1X1 276 aaPredicted RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 OR51J1Q9H342 316 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 RHOJQ9H4E5 214 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 DHX33Q9H6R0 707 aaKnown RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 AZI2Q9H6S1 392 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 SMYD3Q9H7B4 428 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 PLGRKTQ9HBL7 147 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 LPAR2Q9HBW0 351 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 NGBQ9NPG2 151 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 CYTL1Q9NRR1 136 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 RGS18Q9NS28 235 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 STARD5Q9NSY2 213 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 FAM49BQ9NUQ9 324 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 HOXC10Q9NYD6 342 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 TMEM9Q9P0T7 183 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 MBD2Q9UBB5 411 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 SPRR3Q9UBC9 169 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 IL19Q9UHD0 177 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 BTNL2Q9UIR0 455 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 APPL1Q9UKG1 709 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 ADAM28Q9UKQ2 775 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 KLK12Q9UKR0 248 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 SAMD4AQ9UPU9 718 aaKnown RBP0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 MGAT4BQ9UQ53 548 aa0.74□□□□□ -2.29
SMARCB1-209ENST00000635578 EIF3LQ9Y262 564 aaKnown RBP0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms