RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ZNF229Q9UJW7 825 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 PMF1-BGLAPU3KQ54 211 aa12.93□□□□□ -0.34
LINC00339-208ENST00000634934 MPDZO75970 2070 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 IGHV3-15A0A0B4J1V0 119 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 J3QRK9 145 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 M0R082 166 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 SYNGR4O95473 234 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 ADAP00813 363 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 CDK1P06493 297 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 PIPP12273 146 aaPredicted RBP12.92□□□□□ -0.34
LINC00339-208ENST00000634934 ENPP1P22413 925 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 FPR3P25089 353 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.92□□□□□ -0.34
LINC00339-208ENST00000634934 ITGADQ13349 1161 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 RNLSQ5VYX0 342 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 PLXDC2Q6UX71 529 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 USP43Q70EL4 1123 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 NANOGNBQ7Z5D8 188 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 GALNT5Q7Z7M9 940 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 OAFQ86UD1 273 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 CD163Q86VB7 1156 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 ZNF417Q8TAU3 575 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 FAM57AQ8TBR7 257 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 CHAC2Q8WUX2 184 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 ROBO4Q8WZ75 1007 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 CPNE4Q96A23 557 aaPredicted RBP12.92□□□□□ -0.34
LINC00339-208ENST00000634934 ZNF587Q96SQ5 575 aaPredicted RBP12.92□□□□□ -0.34
LINC00339-208ENST00000634934 CDCA4Q9BXL8 241 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 PAQR5Q9NXK6 330 aaPredicted RBP12.92□□□□□ -0.34
LINC00339-208ENST00000634934 SEC14L4Q9UDX3 406 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 RNF6Q9Y252 685 aa12.92□□□□□ -0.34
LINC00339-208ENST00000634934 NBASA2RRP1 2371 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 TRAV27A0A087WT01 109 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 BLOC1S5-TXNDC5H3BN57 136 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 PRRG2O14669 202 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 KLF4O43474 513 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 EIF1BO60739 113 aaKnown RBP12.91□□□□□ -0.34
LINC00339-208ENST00000634934 SLC19A2O60779 497 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 OR6A2O95222 327 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 ASAH2BP0C7U1 165 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 KLK2P20151 261 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 GSSP48637 474 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 PIGFQ07326 219 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 TSPAN31Q12999 210 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 KRR1Q13601 381 aaKnown RBP12.91□□□□□ -0.34
LINC00339-208ENST00000634934 PON3Q15166 354 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 ZNF181Q2M3W8 571 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 PLEKHG7Q6ZR37 379 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 H1FNTQ75WM6 255 aaPredicted RBP12.91□□□□□ -0.34
LINC00339-208ENST00000634934 ADCK1Q86TW2 530 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 TMEM99Q8N816 258 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 ST6GALNAC3Q8NDV1 305 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 KBTBD8Q8NFY9 601 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 OR5J2Q8NH18 312 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 TNFRSF13CQ96RJ3 184 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 UCN2Q96RP3 112 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 TRIB1Q96RU8 372 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 NAA11Q9BSU3 229 aaPredicted RBP12.91□□□□□ -0.34
LINC00339-208ENST00000634934 COPS4Q9BT78 406 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 PRRG4Q9BZD6 226 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 UCK2Q9BZX2 261 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 CHST11Q9NPF2 352 aa12.91□□□□□ -0.34
LINC00339-208ENST00000634934 MCTS1Q9ULC4 181 aaKnown RBP12.91□□□□□ -0.34
LINC00339-208ENST00000634934 PAIP2BQ9ULR5 123 aaKnown RBP12.91□□□□□ -0.34
LINC00339-208ENST00000634934 UBR5O95071 2799 aaPredicted RBP12.9□□□□□ -0.34
LINC00339-208ENST00000634934 AHRRA9YTQ3 701 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 DNPH1O43598 174 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 BMP4P12644 408 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 CD36P16671 472 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 GSTM3P21266 225 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 PSMB9P28065 219 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 SLC9A3P48764 834 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 AGFG1P52594 562 aaKnown RBP12.9□□□□□ -0.34
LINC00339-208ENST00000634934 ZNF45Q02386 682 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 ZNF239Q16600 458 aaKnown RBP12.9□□□□□ -0.34
LINC00339-208ENST00000634934 TIMM50Q3ZCQ8 353 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 EMC4Q5J8M3 183 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 PAQR6Q6TCH4 344 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 CCDC103Q8IW40 242 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 SCAIQ8N9R8 606 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 NDNFQ8TB73 568 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 FNDC9Q8TBE3 224 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 ZPLD1Q8TCW7 415 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 LIPHQ8WWY8 451 aa12.9□□□□□ -0.34
LINC00339-208ENST00000634934 MRPL39Q9NYK5 338 aaKnown RBP12.9□□□□□ -0.34
LINC00339-208ENST00000634934 HELZ2Q9BYK8 2649 aaKnown RBP12.9□□□□□ -0.34
LINC00339-208ENST00000634934 EFCAB10A6NFE3 127 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 METTL15A6NJ78 407 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 SLC22A20A6NK97 555 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 FIGNL2A6NMB9 653 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 ZNF814B7Z6K7 855 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 PLPP3O14495 311 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 SMAD9O15198 467 aaKnown RBP12.89□□□□□ -0.35
LINC00339-208ENST00000634934 SOX14O95416 240 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 ADORA3P0DMS8 318 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 AHCYP23526 432 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 AQP2P41181 271 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 MAP2K4P45985 399 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 CBX3Q13185 183 aa12.89□□□□□ -0.35
LINC00339-208ENST00000634934 SF3B4Q15427 424 aaKnown RBP eCLIP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms