RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 CALCBP10092 127 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 TNNI3P19429 210 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 DPP4P27487 766 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 PEBP1P30086 187 aaKnown RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 HNRNPH3P31942 346 aaKnown RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 CASP14P31944 242 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 FCGR2BP31994 310 aaPredicted RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ADRA1AP35348 466 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 PRLHRP49683 370 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF140P52738 457 aaPredicted RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 EFNA3P52797 238 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 RPL27P61353 136 aaKnown RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ERVK11-1P61568 191 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ERVK-16P61578 105 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 RPS4XP62701 263 aaKnown RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 XIAPP98170 497 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 CYCSP99999 105 aaKnown RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 NAAAQ02083 359 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 DHODHQ02127 395 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ACY1Q03154 408 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 RBBP4Q09028 425 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 RAPSNQ13702 412 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 KLF5Q13887 457 aaPredicted RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 PIGHQ14442 188 aaPredicted RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ZIC1Q15915 447 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 HAGHQ16775 308 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ADPRMQ3LIE5 342 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF876PQ49A33 203 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ACSF3Q4G176 576 aaPredicted RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 BOLA3Q53S33 107 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 TMEM41BQ5BJD5 291 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 FAM182AQ5T1J6 154 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ADAMTSL4-AS1Q5T5F5 129 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 WLSQ5T9L3 541 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 RHBDD2Q6NTF9 364 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 SCYL2Q6P3W7 929 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 LRRC8BQ6P9F7 803 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 FAM199XQ6PEV8 388 aaPredicted RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 DCUN1D2Q6PH85 259 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 SPNS3Q6ZMD2 512 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 C3P1Q6ZMU1 363 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF730Q6ZMV8 503 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 DPY19L2P2Q6ZN68 376 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 FRRS1Q6ZNA5 592 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 Q6ZRP5 223 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 FAM92BQ6ZTR7 304 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 COX15Q7KZN9 410 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ASRGL1Q7L266 308 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ZER1Q7Z7L7 766 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 TBC1D21Q8IYX1 336 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 LINC00518Q8N0U6 118 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 SLC34A3Q8N130 599 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 OR10G7Q8NGN6 311 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 OR2Y1Q8NGV0 311 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 FAM76AQ8TAV0 307 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 FBXO30Q8TB52 745 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 PDCD6IPQ8WUM4 868 aaKnown RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ITLN2Q8WWU7 325 aaPredicted RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 THRSPQ92748 146 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 MCHR2Q969V1 340 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 C11orf52Q96A22 123 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 MRPL24Q96A35 216 aaKnown RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 RBM18Q96H35 190 aaKnown RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 LRR1Q96L50 414 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ALKBH3Q96Q83 286 aaPredicted RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 NRTNQ99748 197 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 TXN2Q99757 166 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 TPPP3Q9BW30 176 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF416Q9BWM5 594 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 CLEC7AQ9BXN2 247 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 MRPL13Q9BYD1 178 aaKnown RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 SLC25A51Q9H1U9 297 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 OR52A5Q9H2C5 316 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 HAUS4Q9H6D7 363 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 SUDS3Q9H7L9 328 aaPredicted RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 MED20Q9H944 212 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 CENPMQ9NSP4 180 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ATAD3AQ9NVI7 634 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 ASF1BQ9NVP2 202 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 TEX10Q9NXF1 929 aaPredicted RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 GPR83Q9NYM4 423 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 IL17CQ9P0M4 197 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 P2RX2Q9UBL9 471 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 EXTL2Q9UBQ6 330 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 TBK1Q9UHD2 729 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 LAMP5Q9UJQ1 280 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 FOXJ3Q9UPW0 622 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 KLHDC2Q9Y2U9 406 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 SLC6A5Q9Y345 797 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 PYGO1Q9Y3Y4 419 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 HCFC1P51610 2035 aa2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 MDC1Q14676 2089 aaKnown RBP2.05□□□□□ -2.08
SMARCB1-208ENST00000634926 CMYA5Q8N3K9 4069 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 IGLV3-12A0A075B6K2 115 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 A0A087X0T9 212 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 LOC390937A0A1W2PQ73 354 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 RNF222A6NCQ9 220 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 MGAT4DA6NG13 374 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 ARGFXA6NJG6 315 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 VSTM2BA6NLU5 285 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms