RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SSX7Q7RTT5 188 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 APTXQ7Z2E3 356 aaKnown RBP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 TMEM144Q7Z5S9 345 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 TMED4Q7Z7H5 227 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 MOB3BQ86TA1 216 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 PIM3Q86V86 326 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SLC38A5Q8WUX1 472 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 TFAP2CQ92754 450 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 YIPF5Q969M3 257 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 C18orf25Q96B23 403 aaPredicted RBP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 NUS1Q96E22 293 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 FAHD2AQ96GK7 314 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 ZNF512Q96ME7 567 aaPredicted RBP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 TMEM56Q96MV1 263 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 ERGIC2Q96RQ1 377 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 TSNAXQ99598 290 aaKnown RBP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SDHCQ99643 169 aaPredicted RBP4.33□□□□□ -1.72
SDCBP-213ENST00000630925 ATF6BQ99941 703 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 ABHD14AQ9BUJ0 271 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 PRO3102Q9H379 93 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 UGT1A7Q9HAW7 530 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 RHOFQ9HBH0 211 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 CUTCQ9NTM9 273 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 RWDD2AQ9UIY3 292 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 RAB26Q9ULW5 256 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 NPIPA1Q9UND3 350 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 TMED3Q9Y3Q3 217 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 TMEM56-RWDD3S4R434 201 aa4.33□□□□□ -1.72
SDCBP-213ENST00000630925 SCN4AP35499 1836 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 ABCB11O95342 1321 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 LAMA3Q16787 3333 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 DDTLA6NHG4 134 aaPredicted RBP4.32□□□□□ -1.72
SDCBP-213ENST00000630925 METTL15A6NJ78 407 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 SRRM4A7MD48 611 aaKnown RBP4.32□□□□□ -1.72
SDCBP-213ENST00000630925 NEDD8-MDP1E9PL57 170 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 F5H697 171 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 DCTN6O00399 190 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 SIGLEC5O15389 551 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 MSH4O15457 936 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 TAPBPO15533 448 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 GRAP2O75791 330 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 DIRAS1O95057 198 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 WDPCPO95876 746 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 CD160O95971 181 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 KNG1P01042 644 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 SERPINB5P36952 375 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 ERVPABLB-1P60509 514 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 BLOC1S1P78537 153 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 TLE4Q04727 773 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 APOFQ13790 326 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 HAGHQ16775 308 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 FAM214AQ32MH5 1076 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 GAGE13Q4V321 117 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 CST9Q5W186 159 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 FAM199XQ6PEV8 388 aaPredicted RBP4.32□□□□□ -1.72
SDCBP-213ENST00000630925 ZNF790Q6PG37 636 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 DHRS4L2Q6PKH6 230 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 SH2D5Q6ZV89 423 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 GDPD3Q7L5L3 318 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 SPATA6LQ8N4H0 392 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 NANOGP1Q8N7R0 232 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 MDS2Q8NDY4 140 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 ZFP28Q8NHY6 868 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 PLPPR1Q8TBJ4 325 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 FAM136AQ96C01 138 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 CENPNQ96H22 339 aaPredicted RBP4.32□□□□□ -1.72
SDCBP-213ENST00000630925 KAZALD1Q96I82 304 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 KIRREL1Q96J84 757 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 MS4A14Q96JA4 679 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 POM121L2Q96KW2 1035 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 SORCS2Q96PQ0 1159 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 GPHA2Q96T91 129 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 CDCA3Q99618 268 aaPredicted RBP4.32□□□□□ -1.72
SDCBP-213ENST00000630925 BTBD10Q9BSF8 475 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 HCAR1Q9BXC0 346 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 PRRG4Q9BZD6 226 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 ING2Q9H160 280 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 TLNRD1Q9H1K6 362 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 DEFB129Q9H1M3 183 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 IKZF5Q9H5V7 419 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 EML4Q9HC35 981 aaKnown RBP4.32□□□□□ -1.72
SDCBP-213ENST00000630925 IL1RAPQ9NPH3 570 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 FGF21Q9NSA1 209 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 TAS2R1Q9NYW7 299 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 SIGLEC8Q9NYZ4 499 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 TREM2Q9NZC2 230 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 NPAP1Q9NZP6 1156 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 ARL2BPQ9Y2Y0 163 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 RBBP6Q7Z6E9 1792 aaKnown RBP4.32□□□□□ -1.72
SDCBP-213ENST00000630925 PIK3C2GO75747 1445 aa4.32□□□□□ -1.72
SDCBP-213ENST00000630925 KIR2DL5BA0A0G2JN68 375 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 KIR2DL5BA0A0G2JPC4 375 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 PSMD12O00232 456 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-213ENST00000630925 IMPA2O14732 288 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 TMPRSS11DO60235 418 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 SNX3O60493 162 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 IFNA2P01563 188 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 PGCP20142 388 aa4.31□□□□□ -1.72
SDCBP-213ENST00000630925 APOBEC1P41238 236 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms