RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 SLC35D2Q76EJ3 337 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 SLC46A3Q7Z3Q1 461 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 BIVMQ86UB2 503 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 NKAIN4Q8IVV8 208 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 OFCC1Q8IZS5 231 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 IL17RDQ8NFM7 739 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 OR6N1Q8NGY5 312 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 TMEM255BQ8WV15 326 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 SLC25A44Q96H78 314 aaPredicted RBP19.5■□□□□ 0.71
SF1-220ENST00000626028 TXNDC15Q96J42 360 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 LRRC37BQ96QE4 947 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 KCNS3Q9BQ31 491 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 EMC6Q9BV81 110 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 CBLN4Q9NTU7 201 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 STX18Q9P2W9 335 aaKnown RBP19.5■□□□□ 0.71
SF1-220ENST00000626028 RPS6KA6Q9UK32 745 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 A4GNTQ9UNA3 340 aa19.5■□□□□ 0.71
SF1-220ENST00000626028 NPIPB13A6NJU9 1138 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 NPIPB4C9JG80 1138 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 C11orf98E9PRG8 122 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 M0R3G1 203 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 RNF13O43567 381 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 OR7A10O76100 309 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 CD8AP01732 235 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 CRYAAP02489 173 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 BMP4P12644 408 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 IFNGR1P15260 489 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 CBR1P16152 277 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 ARR3P36575 388 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 BIDP55957 195 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 IFI44LQ53G44 452 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 FBXL14Q8N1E6 418 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 LRRC17Q8N6Y2 441 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 SGTBQ96EQ0 304 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 ULBP2Q9BZM5 246 aa19.49■□□□□ 0.71
SF1-220ENST00000626028 BARX1Q9HBU1 254 aaPredicted RBP19.49■□□□□ 0.71
SF1-220ENST00000626028 IGHV1-18A0A0C4DH31 117 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 SHOX2O60902 331 aaPredicted RBP19.48■□□□□ 0.71
SF1-220ENST00000626028 FUT1P19526 365 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 CSNK1A1P48729 337 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 UGT2B15P54855 530 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 SPOCK1Q08629 439 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 CAMK2DQ13557 499 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 ANKDD1AQ495B1 522 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 SPATS1Q496A3 300 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 CARD17Q5XLA6 110 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 RNF113BQ8IZP6 322 aaKnown RBP19.48■□□□□ 0.71
SF1-220ENST00000626028 MUC15Q8N387 334 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 ANKS4BQ8N8V4 417 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 ZNF566Q969W8 418 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 ZNF837Q96EG3 531 aaPredicted RBP19.48■□□□□ 0.71
SF1-220ENST00000626028 Q96MF0 132 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 FNDC11Q9BVV2 318 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 ANKRD19PQ9H560 264 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 NDE1Q9NXR1 346 aa19.48■□□□□ 0.71
SF1-220ENST00000626028 NIPBLQ6KC79 2804 aaeCLIP19.47■□□□□ 0.71
SF1-220ENST00000626028 A0A096LPE4 126 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 A0A1W2PPZ6 126 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 A0A1W2PRG6 482 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 BLOC1S5-TXNDC5H3BN57 136 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 GMNNO75496 209 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 ZNF682O95780 498 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 INHBBP09529 407 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 APOBEC3AP31941 199 aaPredicted RBP19.47■□□□□ 0.71
SF1-220ENST00000626028 DAP3P51398 398 aaKnown RBP19.47■□□□□ 0.71
SF1-220ENST00000626028 TRAM2Q15035 370 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 PHYHD1Q5SRE7 291 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 C11orf71Q6IPW1 123 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 FKBP9P1Q75LS8 142 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 PIWIL3Q7Z3Z3 882 aaKnown RBP19.47■□□□□ 0.71
SF1-220ENST00000626028 VTCN1Q7Z7D3 282 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 OR4F15Q8NGB8 312 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 PFN4Q8NHR9 129 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 TMEM54Q969K7 222 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 GLTPQ9NZD2 209 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 FBXL3Q9UKT7 428 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 POFUT2Q9Y2G5 429 aa19.47■□□□□ 0.71
SF1-220ENST00000626028 MGRN1O60291 552 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 BCL10O95999 233 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 SERPINA1P01009 418 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 FABP6P51161 128 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 MNAT1P51948 309 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 NAAAQ02083 359 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 CHRNB3Q05901 458 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 RPL18Q07020 188 aaKnown RBP19.46■□□□□ 0.71
SF1-220ENST00000626028 TAF11Q15544 211 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 FXNQ16595 210 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 NRN1LQ496H8 165 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 CYP4Z1Q86W10 505 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 NANOS1Q8WY41 292 aaKnown RBP19.46■□□□□ 0.71
SF1-220ENST00000626028 FAM162AQ96A26 154 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 COX4I2Q96KJ9 171 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 SEPHS2Q99611 448 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 FOXB1Q99853 325 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 C20orf141Q9NUB4 165 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 FBXO9Q9UK97 447 aaPredicted RBP19.46■□□□□ 0.71
SF1-220ENST00000626028 SAMD4AQ9UPU9 718 aaKnown RBP19.46■□□□□ 0.71
SF1-220ENST00000626028 MOKQ9UQ07 419 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 ATP23Q9Y6H3 246 aa19.46■□□□□ 0.71
SF1-220ENST00000626028 ATP6V1G2-DDX39BF2Z307 99 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms