RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 TARM1B6A8C7 271 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 NSA2O95478 260 aaKnown RBP8.25□□□□□ -1.09
VCL-206ENST00000623461 SOD2P04179 222 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 TBPP20226 339 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 FGF9P31371 208 aaPredicted RBP8.25□□□□□ -1.09
VCL-206ENST00000623461 ARRB2P32121 409 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 SLC22A6Q4U2R8 563 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 SLC38A6Q8IZM9 456 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 GABRG1Q8N1C3 465 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 IL17RCQ8NAC3 791 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 OR13C9Q8NGT0 318 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 SCLYQ96I15 445 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 TRAF4Q9BUZ4 470 aaPredicted RBP8.25□□□□□ -1.09
VCL-206ENST00000623461 DNAJC5Q9H3Z4 198 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 CBLCQ9ULV8 474 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 CHST2Q9Y4C5 530 aa8.25□□□□□ -1.09
VCL-206ENST00000623461 RP1L1Q8IWN7 2480 aaPredicted RBP8.25□□□□□ -1.09
VCL-206ENST00000623461 ZNF593O00488 134 aaPredicted RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 PNPP00491 289 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 H2AFB1P0C5Y9 115 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 NQO2P16083 231 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 HIST1H1TP22492 207 aaPredicted RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 CCNOP22674 350 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 GABRR1P24046 479 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 HLXQ14774 488 aaPredicted RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 MPPED2Q15777 294 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 RPUSD3Q6P087 351 aaKnown RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 DBX2Q6ZNG2 339 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 Q6ZRG5 221 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 OTOP2Q7RTS6 562 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 PRSS35Q8N3Z0 413 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 OR1E3Q8WZA6 343 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 CMSS1Q9BQ75 279 aaKnown RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 ALKBH4Q9NXW9 302 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 TMEFF2Q9UIK5 374 aaPredicted RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 OR4E1P0C645 316 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 RAB5AP20339 215 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 ADIRFQ15847 76 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 PRSS36Q5K4E3 855 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 EOGTQ5NDL2 527 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 EXOSC6Q5RKV6 272 aaKnown RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 OR5M10Q6IEU7 315 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 KIAA0907Q7Z7F0 614 aaPredicted RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 WDR5BQ86VZ2 330 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 RNF175Q8N4F7 328 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 OR5AR1Q8NGP9 310 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 OR2G3Q8NGZ4 309 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 GNPNAT1Q96EK6 184 aaPredicted RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 ZC3HAV1LQ96H79 300 aaKnown RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 RHOFQ9HBH0 211 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 GPR55Q9Y2T6 319 aaPredicted RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 URGCP-MRPS24S4R325 110 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 HMSDA8MTL9 139 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 GLCEO94923 617 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 ZNF888P0CJ79 500 aaPredicted RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 ZNF28P17035 718 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 ERVK-16P61578 105 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 RNF4P78317 190 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 IHHQ14623 411 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 LTB4RQ15722 352 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 ELFN2Q5R3F8 820 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 FAM71E1Q6IPT2 247 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 GKN2Q86XP6 184 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 ZNF439Q8NDP4 499 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 TEAD3Q99594 435 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 ENKD1Q9H0I2 346 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 LDAHQ9H6V9 325 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 NCDNQ9UBB6 729 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 RNF212BA8MTL3 300 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 FZD9O00144 591 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 NNATQ16517 81 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 CDONQ4KMG0 1287 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 ANKRD34AQ69YU3 496 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 TMEM71Q6P5X7 295 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 CMTM4Q8IZR5 234 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 LGI3Q8N145 548 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 FAM58AQ8N1B3 248 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 SYS1Q8N2H4 156 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 ZNF485Q8NCK3 441 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 OR13C8Q8NGS7 320 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 FBXW5Q969U6 566 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 PAPOLGQ9BWT3 736 aaKnown RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 BCORQ6W2J9 1755 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 PRAMEF27A3QJZ7 478 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 OR6C76A6NM76 312 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 RNASEK-C17orf49H0YIS7 233 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 SLC16A7O60669 478 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 IQCF3P0C7M6 154 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 ACVR1Q04771 509 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 PRAMEF9Q5VWM5 478 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 GALNT16Q8N428 558 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 ANKRD9Q96BM1 317 aaPredicted RBP8.24□□□□□ -1.09
VCL-206ENST00000623461 METTL9Q9H1A3 318 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 FLVCR2Q9UPI3 526 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 WNT6Q9Y6F9 365 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 TK1P04183 234 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 ZNF728P0DKX0 622 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 F3P13726 295 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 ACHEP22303 614 aa8.24□□□□□ -1.09
VCL-206ENST00000623461 SNRPEP62304 92 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms