RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 FLVCR2Q9UPI3 526 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 V9GYH0 126 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 ZNF646O15015 1829 aaPredicted RBP11.76□□□□□ -0.53
MSH6-215ENST00000622629 PATJQ8NI35 1801 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 ANKRD36A6QL64 1941 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 A0A0A6YYJ9 748 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 CENPVL1A0A0U1RR11 272 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 F5H5P2 479 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 CRYZL1O95825 349 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 HRGP04196 525 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 PTBP1P26599 531 aaKnown RBP eCLIP11.76□□□□□ -0.53
MSH6-215ENST00000622629 CD34P28906 385 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 LSSP48449 732 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 COL28A1Q2UY09 1125 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 YIF1BQ5BJH7 314 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 CRIPAKQ8N1N5 446 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 MEPEQ9NQ76 525 aaPredicted RBP11.76□□□□□ -0.53
MSH6-215ENST00000622629 EVA1BQ9NVM1 165 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 MMP17Q9ULZ9 603 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 MN1Q10571 1320 aaPredicted RBP11.76□□□□□ -0.53
MSH6-215ENST00000622629 CCNOP22674 350 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 CCR9P51686 369 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 BDH1Q02338 343 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 ZNF79Q15937 498 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 C3P1Q6ZMU1 363 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 CFAP77Q6ZQR2 320 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 CMTM4Q8IZR5 234 aa11.76□□□□□ -0.53
MSH6-215ENST00000622629 ZNF587Q96SQ5 575 aaPredicted RBP11.76□□□□□ -0.53
MSH6-215ENST00000622629 TMEM212A6NML5 194 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 TP53I11O14683 189 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 SIX6O95475 246 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 CLDN20P56880 219 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 TMPRSS11FQ6ZWK6 438 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 DDOQ99489 341 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 C20orf85Q9H1P6 137 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 TREM1Q9NP99 234 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 CYSLTR2Q9NS75 346 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 TMED7-TICAM2A0A0A6YYA0 188 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 TLCD2A6NGC4 264 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 SPINT1O43278 529 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 SFTPBP07988 381 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 BTG1P62324 171 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 ALKAL2Q6UX46 152 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 SFTPA2Q8IWL1 248 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 UEVLDQ8IX04 471 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 FAM109AQ8N4B1 249 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 HAVCR2Q8TDQ0 301 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 ERVMER34-1Q9H9K5 563 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 FAM60AQ9NP50 221 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 TMED7Q9Y3B3 224 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 EMC9Q9Y3B6 208 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 NUPL2O15504 423 aaKnown RBP11.75□□□□□ -0.53
MSH6-215ENST00000622629 RLN2P04090 185 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 DCNP07585 359 aaKnown RBP11.75□□□□□ -0.53
MSH6-215ENST00000622629 CELA2BP08218 269 aaPredicted RBP11.75□□□□□ -0.53
MSH6-215ENST00000622629 EPXP11678 715 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 PTHLHP12272 177 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 ATF1P18846 271 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 POU3F4P49335 361 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 OR1D5P58170 312 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 MFSD13AQ14CX5 517 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 ABCA11PQ4W5N1 156 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 ZNF704Q6ZNC4 412 aaPredicted RBP11.75□□□□□ -0.53
MSH6-215ENST00000622629 Q6ZS52 159 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 SLC16A9Q7RTY1 509 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 BOLLQ8N9W6 283 aaKnown RBP11.75□□□□□ -0.53
MSH6-215ENST00000622629 ZFAND1Q8TCF1 268 aa11.75□□□□□ -0.53
MSH6-215ENST00000622629 NPIPA2E9PIF3 369 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 NPIPA3F8WFD2 350 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 DNAJB6O75190 326 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 ANXA7P20073 488 aaKnown RBP11.74□□□□□ -0.53
MSH6-215ENST00000622629 HTR2AP28223 471 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 RPL18Q07020 188 aaKnown RBP11.74□□□□□ -0.53
MSH6-215ENST00000622629 ZNF628Q5EBL2 1059 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 ZAR1Q86SH2 424 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 PDZD9Q8IXQ8 264 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 CMIPQ8IY22 773 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 OR6V1Q8N148 313 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 DDIT4LQ96D03 193 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 PELI1Q96FA3 418 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 URM1Q9BTM9 101 aaKnown RBP11.74□□□□□ -0.53
MSH6-215ENST00000622629 HPF1Q9NWY4 346 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 ALKBH4Q9NXW9 302 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 DKKL1Q9UK85 242 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 F5H5K5 113 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 SEC14L5O43304 696 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 PRH1P02810 166 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 APEHP13798 732 aaKnown RBP11.74□□□□□ -0.53
MSH6-215ENST00000622629 GABRG2P18507 467 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 BEX5Q5H9J7 111 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 SLC35D3Q5M8T2 416 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 CREB3L2Q70SY1 520 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 ABHD12BQ7Z5M8 362 aaPredicted RBP11.74□□□□□ -0.53
MSH6-215ENST00000622629 MCEMP1Q8IX19 187 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 HAVCR1Q96D42 359 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 ZNF681Q96N22 645 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 OR11A1Q9GZK7 315 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 A0A0B4J2E0 115 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 A0A1B0GX12 115 aa11.74□□□□□ -0.53
MSH6-215ENST00000622629 IDSB3KWA1 339 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms