RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 TTTY10Q9BZA0 68 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 BABAM2Q9NXR7 383 aa19.27■□□□□ 0.68
SPAST-204ENST00000621856 A6NIZ1 184 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 DCTN6O00399 190 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 FZD7O75084 574 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 IFNGR1P15260 489 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 ZNF17P17021 662 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 SRD5A2P31213 254 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 RAP1BP61224 184 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 RAP1AP62834 184 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 HSF1Q00613 529 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 POU3F1Q03052 451 aaPredicted RBP19.26■□□□□ 0.67
SPAST-204ENST00000621856 SPINK14Q6IE38 97 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 TUBA3EQ6PEY2 450 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 IGF2-ASQ6U949 168 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 LINC00696Q6ZRV3 163 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 SSX6Q7RTT6 188 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 ZNF511Q8NB15 262 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 MRPL48Q96GC5 212 aaKnown RBP19.26■□□□□ 0.67
SPAST-204ENST00000621856 C4orf36Q96KX1 117 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 PIGQQ9BRB3 760 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 NUAK2Q9H093 628 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 TRIM36Q9NQ86 728 aa19.26■□□□□ 0.67
SPAST-204ENST00000621856 A0A1W2PNV4 684 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 SLC30A4O14863 429 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 CELP19835 753 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 GABRA5P31644 462 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 ROR2Q01974 943 aaKnown RBP19.25■□□□□ 0.67
SPAST-204ENST00000621856 BDH1Q02338 343 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 EEF1A1P5Q5VTE0 462 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 SLC35D2Q76EJ3 337 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 RFLNBQ8N5W9 214 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 ADPRHL1Q8NDY3 354 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 ASB10Q8WXI3 467 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 THAP4Q8WY91 577 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 TIMP4Q99727 224 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 DEPPQ9NTK1 212 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 VSX1Q9NZR4 365 aaPredicted RBP19.25■□□□□ 0.67
SPAST-204ENST00000621856 ARGFXA6NJG6 315 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 LRRC3CA6NJW4 275 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 SULT2B1O00204 365 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 ACTA2P62736 377 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 ACTG2P63267 376 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 SLC35A1P78382 337 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 SLC16A9Q7RTY1 509 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 PXKQ7Z7A4 578 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 OR14L1PQ8NHC6 308 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 SIGLEC12Q96PQ1 595 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 DLL3Q9NYJ7 618 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 SF3B6Q9Y3B4 125 aaKnown RBP19.25■□□□□ 0.67
SPAST-204ENST00000621856 FKBP7Q9Y680 259 aa19.25■□□□□ 0.67
SPAST-204ENST00000621856 TVP23AA6NH52 213 aa19.24■□□□□ 0.67
SPAST-204ENST00000621856 ZNF670-ZNF695F2Z2N8 137 aa19.24■□□□□ 0.67
SPAST-204ENST00000621856 CAPZA2P47755 286 aa19.24■□□□□ 0.67
SPAST-204ENST00000621856 CENPAP49450 140 aa19.24■□□□□ 0.67
SPAST-204ENST00000621856 OR12D2P58182 307 aa19.24■□□□□ 0.67
SPAST-204ENST00000621856 FAM205BPQ63HN1 556 aa19.24■□□□□ 0.67
SPAST-204ENST00000621856 YRDCQ86U90 279 aaKnown RBP19.24■□□□□ 0.67
SPAST-204ENST00000621856 SNX33Q8WV41 574 aa19.24■□□□□ 0.67
SPAST-204ENST00000621856 MIB2Q96AX9 1013 aa19.24■□□□□ 0.67
SPAST-204ENST00000621856 TRMT61AQ96FX7 289 aaKnown RBP19.24■□□□□ 0.67
SPAST-204ENST00000621856 PLA2G3Q9NZ20 509 aa19.24■□□□□ 0.67
SPAST-204ENST00000621856 BOKQ9UMX3 212 aaPredicted RBP19.24■□□□□ 0.67
SPAST-204ENST00000621856 COPS3Q9UNS2 423 aa19.24■□□□□ 0.67
SPAST-204ENST00000621856 TRAPPC4Q9Y296 219 aa19.24■□□□□ 0.67
SPAST-204ENST00000621856 SLC22A23A1A5C7 686 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 NPIPB13A6NJU9 1138 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 NPIPB4C9JG80 1138 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 LRRTM2O43300 516 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 SLC16A7O60669 478 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 NEURL1O76050 574 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 WDPCPO95876 746 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 RRADP55042 308 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 TAS2R43P59537 309 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 HSF2Q03933 536 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 RUNX1T1Q06455 604 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 DYNC1I2Q13409 638 aaKnown RBP19.23■□□□□ 0.67
SPAST-204ENST00000621856 OR1C1Q15619 314 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 CRTC2Q53ET0 693 aaPredicted RBP19.23■□□□□ 0.67
SPAST-204ENST00000621856 TP53I3Q53FA7 332 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 TMPPEQ6ZT21 453 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 VASH1Q7L8A9 365 aaPredicted RBP19.23■□□□□ 0.67
SPAST-204ENST00000621856 UEVLDQ8IX04 471 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 GALNT16Q8N428 558 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 TM9SF2Q99805 663 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 TMED9Q9BVK6 235 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 FANCFQ9NPI8 374 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 ZMIZ1Q9ULJ6 1067 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 B9D1Q9UPM9 204 aa19.23■□□□□ 0.67
SPAST-204ENST00000621856 ZFHX2Q9C0A1 2572 aaPredicted RBP19.23■□□□□ 0.67
SPAST-204ENST00000621856 PINLYPA6NC86 204 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 A6NL46 340 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 ZNF292O60281 2723 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 TRAPPC6AO75865 159 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 PMS2P2O95744 297 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 PRKAR1AP10644 381 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 GDF1P27539 372 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 TMEM225Q6GV28 225 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 DTNBP1Q96EV8 351 aa19.22■□□□□ 0.67
SPAST-204ENST00000621856 TXNDC15Q96J42 360 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms