RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 SLC38A4Q969I6 547 aa9.88□□□□□ -0.83
CPNE3-210ENST00000621245 SLC35B4Q969S0 331 aa9.88□□□□□ -0.83
CPNE3-210ENST00000621245 SLC41A3Q96GZ6 507 aa9.88□□□□□ -0.83
CPNE3-210ENST00000621245 DOK1Q99704 481 aa9.88□□□□□ -0.83
CPNE3-210ENST00000621245 KCNS3Q9BQ31 491 aa9.88□□□□□ -0.83
CPNE3-210ENST00000621245 PIMREGQ9BSJ6 248 aa9.88□□□□□ -0.83
CPNE3-210ENST00000621245 RASSF4Q9H2L5 321 aa9.88□□□□□ -0.83
CPNE3-210ENST00000621245 TPK1Q9H3S4 243 aa9.88□□□□□ -0.83
CPNE3-210ENST00000621245 RAD21L1Q9H4I0 556 aa9.88□□□□□ -0.83
CPNE3-210ENST00000621245 C12orf10Q9HB07 376 aa9.88□□□□□ -0.83
CPNE3-210ENST00000621245 CACYBPQ9HB71 228 aaKnown RBP9.88□□□□□ -0.83
CPNE3-210ENST00000621245 THUMPD1Q9NXG2 353 aaKnown RBP9.88□□□□□ -0.83
CPNE3-210ENST00000621245 B3GNT2Q9NY97 397 aa9.88□□□□□ -0.83
CPNE3-210ENST00000621245 MYEF2Q9P2K5 600 aaKnown RBP9.88□□□□□ -0.83
CPNE3-210ENST00000621245 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.88□□□□□ -0.83
CPNE3-210ENST00000621245 CDC42EP3Q9UKI2 254 aa9.88□□□□□ -0.83
CPNE3-210ENST00000621245 FKBP7Q9Y680 259 aa9.88□□□□□ -0.83
CPNE3-210ENST00000621245 SH3PXD2BA1X283 911 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 ZNF99A8MXY4 864 aaPredicted RBP9.87□□□□□ -0.83
CPNE3-210ENST00000621245 LMX1BO60663 402 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 MFN2O95140 757 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 PATE4P0C8F1 98 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 APEHP13798 732 aaKnown RBP9.87□□□□□ -0.83
CPNE3-210ENST00000621245 CAPZA2P47755 286 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 PPOXP50336 477 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 CRYBA2P53672 197 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 MTPNP58546 118 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 PIGFQ07326 219 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 SNTB2Q13425 540 aaKnown RBP9.87□□□□□ -0.83
CPNE3-210ENST00000621245 DUSP7Q16829 419 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 C3orf36Q3SXR2 165 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 AGBL2Q5U5Z8 902 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 SPATA21Q7Z572 469 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 LRP11Q86VZ4 500 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 CARM1Q86X55 608 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 UEVLDQ8IX04 471 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 ADPRHL1Q8NDY3 354 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 LRRC8CQ8TDW0 803 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 ARHGDIGQ99819 225 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 CCDC28BQ9BUN5 200 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 BEX2Q9BXY8 128 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 MRPL37Q9BZE1 423 aaKnown RBP9.87□□□□□ -0.83
CPNE3-210ENST00000621245 ZNF385DQ9H6B1 395 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 TMEM38AQ9H6F2 299 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 ARMC7Q9H6L4 198 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 TMEM160Q9NX00 188 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 TESQ9UGI8 421 aaKnown RBP9.87□□□□□ -0.83
CPNE3-210ENST00000621245 FZR1Q9UM11 496 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 GMEB1Q9Y692 573 aa9.87□□□□□ -0.83
CPNE3-210ENST00000621245 LOC100289279A0A1B0GTE1 492 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 LOC102725191A0A1B0GVB3 256 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 LOC390937A0A1W2PQ73 354 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 OR6C65A6NJZ3 312 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 PLPP3O14495 311 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 PDE5AO76074 875 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 STAMBPO95630 424 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 CD79AP11912 226 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 BMP4P12644 408 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 DAOP14920 347 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 NQO1P15559 274 aaKnown RBP9.86□□□□□ -0.83
CPNE3-210ENST00000621245 ZNF14P17017 642 aaPredicted RBP9.86□□□□□ -0.83
CPNE3-210ENST00000621245 ZNF23P17027 643 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 GPX2P18283 190 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 GZMKP49863 264 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 MELKQ14680 651 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 MFSD13AQ14CX5 517 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 MAD2L1BPQ15013 274 aaPredicted RBP9.86□□□□□ -0.83
CPNE3-210ENST00000621245 RUNDC3AQ59EK9 446 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 FAM91A1Q658Y4 838 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 ULK3Q6PHR2 472 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 ARMC8Q8IUR7 673 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 ZNF584Q8IVC4 421 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 LRRC17Q8N6Y2 441 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 FAM169BQ8N8A8 192 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 PIK3C3Q8NEB9 887 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 OR4F15Q8NGB8 312 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 OR6T1Q8NGN1 323 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 DNAJA4Q8WW22 397 aaPredicted RBP9.86□□□□□ -0.83
CPNE3-210ENST00000621245 SLC47A1Q96FL8 570 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 ZNF317Q96PQ6 595 aaPredicted RBP9.86□□□□□ -0.83
CPNE3-210ENST00000621245 SHARPINQ9H0F6 387 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 ZNF442Q9H7R0 627 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 MRPL39Q9NYK5 338 aaKnown RBP9.86□□□□□ -0.83
CPNE3-210ENST00000621245 PRDM4Q9UKN5 801 aa9.86□□□□□ -0.83
CPNE3-210ENST00000621245 CPSF4LA6NMK7 179 aaKnown RBP9.85□□□□□ -0.83
CPNE3-210ENST00000621245 C11orf98E9PRG8 122 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 NDUFS8O00217 210 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 KPNA4O00629 521 aaPredicted RBP9.85□□□□□ -0.83
CPNE3-210ENST00000621245 WNT9BO14905 357 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 OR2T1O43869 369 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 ERLIN1O75477 346 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 TGDSO95455 350 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 IFNA2P01563 188 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 ADRA2AP08913 450 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 TNFRSF1BP20333 461 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 NPR2P20594 1047 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 CD247P20963 164 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 ALDH3B1P43353 468 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 ATP4BP51164 291 aa9.85□□□□□ -0.83
CPNE3-210ENST00000621245 NCALDP61601 193 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms