RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 INO80EQ8NBZ0 244 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 OR5T1Q8NG75 326 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 TMEM163Q8TC26 289 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 CNOT9Q92600 299 aaKnown RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 SNX18Q96RF0 628 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 MENTQ9BUN1 341 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 DNTTIP1Q9H147 329 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 SYT4Q9H2B2 425 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 LRRN3Q9H3W5 708 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 ACSS1Q9NUB1 689 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 ZNF175Q9Y473 711 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 HSPB11Q9Y547 144 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 A0A0A6YYH2 397 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 TMEM72A0PK05 275 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 A6NJ64 397 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 B4DXG7 233 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 HCRTR1O43613 425 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 MTRF1O75570 445 aaKnown RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 GLI4P10075 376 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 FRKP42685 505 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 RAB40BQ12829 278 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 P2RY14Q15391 338 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 METRNLQ641Q3 311 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 ZNF793Q6ZN11 406 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 NOXA1Q86UR1 476 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 CLDN22Q8N7P3 220 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 SLC7A6Q92536 515 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 OR11A1Q9GZK7 315 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 ZNF350Q9GZX5 532 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 WDR76Q9H967 626 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 PLA2G3Q9NZ20 509 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 ANKRD34BA5PLL1 514 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 OR5K3A6NET4 321 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 ANKRD61A6NGH8 418 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 MPPED1O15442 326 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 SSX5O60225 188 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 OR7C1O76099 320 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 LGI1O95970 557 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 EPHA1P21709 976 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 APLNRP35414 380 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 RBMXP38159 391 aaKnown RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 DDOSTP39656 456 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 KIR2DL3P43628 341 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 REEP5Q00765 189 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 TATDN3Q17R31 274 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 ABHD17CQ6PCB6 329 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 ARSKQ6UWY0 536 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 TMEM92Q6UXU6 159 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 VASH1Q7L8A9 365 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 SLC16A14Q7RTX9 510 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 UBE3DQ7Z6J8 389 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 LINC01555Q8NAE3 123 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 LSM14AQ8ND56 463 aaKnown RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 OR8D4Q8NGM9 314 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 OR1N1Q8NGS0 311 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 VWCEQ96DN2 955 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 NMNAT3Q96T66 252 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 FAM234AQ9H0X4 552 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 KIR3DX1Q9H7L2 352 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 FBXO9Q9UK97 447 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 C14orf166Q9Y224 244 aaKnown RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 GPR55Q9Y2T6 319 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 SCN2AQ99250 2005 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 OTOGLQ3ZCN5 2332 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 CDH23Q9H251 3354 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 TMEM269A0A1B0GVZ9 245 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 SOCS6O14544 535 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 FCMRO60667 390 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 TP53P04637 393 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 CISD3P0C7P0 127 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 LSSP48449 732 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 CYB561P49447 251 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 SSR4P51571 173 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 FOXL2P58012 376 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 SNRPD2P62316 118 aaKnown RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 SNTB2Q13425 540 aaKnown RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 ZNF658BQ4V348 819 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 NKAIN4Q8IVV8 208 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 SPEM1Q8N4L4 309 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 BBS1Q8NFJ9 593 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 LINC00615Q96LM1 132 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 VRK1Q99986 396 aaPredicted RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 ALG8Q9BVK2 526 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 SEMA4GQ9NTN9 838 aa7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 EXOSC1Q9Y3B2 195 aaKnown RBP7.6□□□□□ -1.19
PTPDC1-204ENST00000620992 TRGV8A0A0C4DH27 118 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 A0A1W2PPC4 97 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 LRIT2A6NDA9 550 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 ACOD1A6NK06 481 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 PCP4L1A6NKN8 68 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 SLC2A10O95528 541 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 PTAFRP25105 342 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 TRIM23P36406 574 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 SLC1A3P43003 542 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 HTR5AP47898 357 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 ASAH1Q13510 395 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 SLC22A10Q63ZE4 541 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 PYHIN1Q6K0P9 492 aa7.59□□□□□ -1.19
PTPDC1-204ENST00000620992 ZNF704Q6ZNC4 412 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms