RNA–Protein interactions for RNA: ENST00000620219.4

CPSF1-213, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF1, Length 4,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-213ENST00000620219 ADGRG3Q86Y34 549 aa14.22□□□□□ -0.13
CPSF1-213ENST00000620219 FNDC8Q8TC99 324 aa14.22□□□□□ -0.13
CPSF1-213ENST00000620219 PTP4A1Q93096 173 aa14.22□□□□□ -0.13
CPSF1-213ENST00000620219 NAA11Q9BSU3 229 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-213ENST00000620219 SLC25A18Q9H1K4 315 aa14.22□□□□□ -0.13
CPSF1-213ENST00000620219 TMEM14AQ9Y6G1 99 aa14.22□□□□□ -0.13
CPSF1-213ENST00000620219 LALBAP00709 142 aa14.22□□□□□ -0.13
CPSF1-213ENST00000620219 PIPP12273 146 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-213ENST00000620219 CDKN2AP42771 156 aaKnown RBP14.22□□□□□ -0.13
CPSF1-213ENST00000620219 RPL27P61353 136 aaKnown RBP14.22□□□□□ -0.13
CPSF1-213ENST00000620219 ZNF528Q3MIS6 628 aa14.22□□□□□ -0.13
CPSF1-213ENST00000620219 TIPARPQ7Z3E1 657 aaKnown RBP14.22□□□□□ -0.13
CPSF1-213ENST00000620219 P4HA3Q7Z4N8 544 aa14.22□□□□□ -0.13
CPSF1-213ENST00000620219 SLC39A7Q92504 469 aa14.22□□□□□ -0.13
CPSF1-213ENST00000620219 BOKQ9UMX3 212 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-213ENST00000620219 MUC3AQ02505 3323 aa14.22□□□□□ -0.13
CPSF1-213ENST00000620219 NTN3O00634 580 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-213ENST00000620219 MYBPHQ13203 477 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 WIPI1Q5MNZ9 446 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-213ENST00000620219 CORO6Q6QEF8 472 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 KANSL1Q7Z3B3 1105 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 ARIH2OSQ8N7S6 290 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 OR13C5Q8NGS8 318 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 GHSRQ92847 366 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 NKD1Q969G9 470 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 FUZQ9BT04 418 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 A0A075B6Q4 140 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 BHLHE40O14503 412 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 CD2P06729 351 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 CRABP1P29762 137 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 ZFP36L1Q07352 338 aaKnown RBP14.21□□□□□ -0.13
CPSF1-213ENST00000620219 AADACL4Q5VUY2 407 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 SLC18B1Q6NT16 456 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 SYT9Q86SS6 491 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 LAX1Q8IWV1 398 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 NAXEQ8NCW5 288 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 TRMT61AQ96FX7 289 aaKnown RBP14.21□□□□□ -0.13
CPSF1-213ENST00000620219 PSD2Q9BQI7 771 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 ICAM5Q9UMF0 924 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 PRRC2CQ9Y520 2896 aaKnown RBP14.21□□□□□ -0.13
CPSF1-213ENST00000620219 MT-ATP6P00846 226 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 MSL3P1P0C860 447 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 EFNA3P52797 238 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 ACSM3Q53FZ2 586 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 COX4I2Q96KJ9 171 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 SLC30A2Q9BRI3 323 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 ACOXLQ9NUZ1 547 aa14.21□□□□□ -0.13
CPSF1-213ENST00000620219 ACOD1A6NK06 481 aa14.21□□□□□ -0.14
CPSF1-213ENST00000620219 SERPINA3P01011 423 aa14.21□□□□□ -0.14
CPSF1-213ENST00000620219 HSF1Q00613 529 aa14.21□□□□□ -0.14
CPSF1-213ENST00000620219 CLPPQ16740 277 aaPredicted RBP14.21□□□□□ -0.14
CPSF1-213ENST00000620219 LRRC69Q6ZNQ3 347 aa14.21□□□□□ -0.14
CPSF1-213ENST00000620219 ARHGEF39Q8N4T4 335 aa14.21□□□□□ -0.14
CPSF1-213ENST00000620219 ZNF283Q8N7M2 679 aa14.21□□□□□ -0.14
CPSF1-213ENST00000620219 TMEM43Q9BTV4 400 aa14.21□□□□□ -0.14
CPSF1-213ENST00000620219 SLIRPQ9GZT3 109 aaKnown RBP14.21□□□□□ -0.14
CPSF1-213ENST00000620219 ELOVL3Q9HB03 270 aa14.21□□□□□ -0.14
CPSF1-213ENST00000620219 PLEKHA1Q9HB21 404 aa14.21□□□□□ -0.14
CPSF1-213ENST00000620219 CKLFQ9UBR5 152 aa14.21□□□□□ -0.14
CPSF1-213ENST00000620219 ZNF223Q9UK11 482 aaPredicted RBP14.21□□□□□ -0.14
CPSF1-213ENST00000620219 AK6Q9Y3D8 172 aaKnown RBP14.21□□□□□ -0.14
CPSF1-213ENST00000620219 IGHV1-45A0A0A0MS14 117 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 ANKRD61A6NGH8 418 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 CDX4O14627 284 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-213ENST00000620219 ARL6IP5O75915 188 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 MAS1P04201 325 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 EIF1P41567 113 aaKnown RBP14.2□□□□□ -0.14
CPSF1-213ENST00000620219 CTBP2P56545 445 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 PCOLCEQ15113 449 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 GALNTL5Q7Z4T8 443 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 LRRC18Q8N456 261 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 FAM83FQ8NEG4 500 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-213ENST00000620219 ZPLD1Q8TCW7 415 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 ORAI1Q96D31 301 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 CCNL2Q96S94 520 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-213ENST00000620219 GABRPO00591 440 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 SYNGR4O95473 234 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 FABP5Q01469 135 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 FMODQ06828 376 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 HSD17B12Q53GQ0 312 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 PDSS1Q5T2R2 415 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 TMPRSS7Q7RTY8 843 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 MRGPREQ86SM8 312 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 SGCZQ96LD1 299 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 CHST11Q9NPF2 352 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 RGS9O75916 674 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-213ENST00000620219 GLCEO94923 617 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 IL11P20809 199 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 RIDAP52758 137 aaKnown RBP14.2□□□□□ -0.14
CPSF1-213ENST00000620219 DEFB109BQ30KR1 87 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 TMEM201Q5SNT2 666 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 ALDH16A1Q8IZ83 802 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 DEFB127Q9H1M4 99 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 RNF121Q9H920 327 aa14.2□□□□□ -0.14
CPSF1-213ENST00000620219 METTL15A6NJ78 407 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 NPIPB9F8W1W9 429 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 OR2T7P0C7T2 308 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 FOXC1Q12948 553 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 SAMD12Q8N8I0 201 aa14.19□□□□□ -0.14
CPSF1-213ENST00000620219 OR2T27Q8NH04 317 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms