RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 RCBTB2O95199 551 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 QDPRP09417 244 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 SLC2A1P11166 492 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 FCGR2AP12318 317 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 RPS4Y1P22090 263 aaKnown RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 IGHV1-2P23083 117 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 CCKARP32238 428 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 PYCR1P32322 319 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 ARF1P84077 181 aaKnown RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 BNIP1Q12981 228 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 VEZF1Q14119 521 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 MFSD13AQ14CX5 517 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 SLC36A3Q495N2 470 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 ZNF440Q8IYI8 595 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 OFCC1Q8IZS5 231 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 ACBD4Q8NC06 268 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 AKR7LQ8NHP1 331 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 RNF128Q8TEB7 428 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 TSPEARQ8WU66 669 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 ASB5Q8WWX0 329 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 HOXB13Q92826 284 aaPredicted RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 ADGRG7Q96K78 797 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 IL4I1Q96RQ9 567 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 TBX5Q99593 518 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 VRK1Q99986 396 aaPredicted RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 NIPSNAP1Q9BPW8 284 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 NAA11Q9BSU3 229 aaPredicted RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 AMBNQ9NP70 447 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 CHST11Q9NPF2 352 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 RPRD1BQ9NQG5 326 aaKnown RBP4.07□□□□□ -1.76
SYCP1-210ENST00000618516 GRHPRQ9UBQ7 328 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 ENPP4Q9Y6X5 453 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 NOTCH3Q9UM47 2321 aa4.07□□□□□ -1.76
SYCP1-210ENST00000618516 MBD3L4A6NDZ8 208 aaPredicted RBP4.06□□□□□ -1.76
SYCP1-210ENST00000618516 MBD3L3A6NE82 208 aaPredicted RBP4.06□□□□□ -1.76
SYCP1-210ENST00000618516 MBD3L5A6NJ08 208 aaPredicted RBP4.06□□□□□ -1.76
SYCP1-210ENST00000618516 ATP6V1G2-DDX39BF2Z307 99 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 TPD52L2O43399 206 aaKnown RBP4.06□□□□□ -1.76
SYCP1-210ENST00000618516 SLC16A7O60669 478 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 MRPL3P09001 348 aaKnown RBP4.06□□□□□ -1.76
SYCP1-210ENST00000618516 GUCA1AP43080 201 aaPredicted RBP4.06□□□□□ -1.76
SYCP1-210ENST00000618516 CSNK1A1P48729 337 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 RASSF2P50749 326 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 GLO1Q04760 184 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 SLC17A1Q14916 467 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 TRAM2Q15035 370 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 ZNF74Q16587 644 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 DNAL1Q4LDG9 190 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 EXOSC6Q5RKV6 272 aaKnown RBP4.06□□□□□ -1.76
SYCP1-210ENST00000618516 TMEM179BQ7Z7N9 219 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 CMIPQ8IY22 773 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 FAM71CQ8NEG0 241 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 OR52E2Q8NGJ4 325 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 OR5J2Q8NH18 312 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 MBD3L2Q8NHZ7 208 aaPredicted RBP4.06□□□□□ -1.76
SYCP1-210ENST00000618516 FANK1Q8TC84 345 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 SLC25A43Q8WUT9 341 aaPredicted RBP4.06□□□□□ -1.76
SYCP1-210ENST00000618516 RASSF5Q8WWW0 418 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 PMM1Q92871 262 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 GMPPAQ96IJ6 420 aaPredicted RBP4.06□□□□□ -1.76
SYCP1-210ENST00000618516 PRRC1Q96M27 445 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 FEVQ99581 238 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 PRSS27Q9BQR3 290 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 PLA2G12AQ9BZM1 189 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 SLCO5A1Q9H2Y9 848 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 RIBC2Q9H4K1 309 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 POLE3Q9NRF9 147 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 MAN2C1Q9NTJ4 1040 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 EMC3Q9P0I2 261 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 HDGFL3Q9Y3E1 203 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 ARHGAP32A7KAX9 2087 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 A0A1B0GVC2 190 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 A0A1W2PRG6 482 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 ZNF587BE7ETH6 402 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 MS4A18H0YCH9 400 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 OR2T1O43869 369 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 KRT36O76013 467 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 CLIC3O95833 236 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 GASTP01350 101 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 ZNF17P17021 662 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 EPHA2P29317 976 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 TIMP3P35625 211 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 UGT2B10P36537 528 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 HTR3AP46098 478 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 FABP6P51161 128 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 SUMO3P55854 103 aaPredicted RBP4.06□□□□□ -1.76
SYCP1-210ENST00000618516 BSPH1Q075Z2 132 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 MS4A18Q3C1V0 323 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 OR2A2Q6IF42 318 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 DHRS4L2Q6PKH6 230 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 TFAP2EQ6VUC0 442 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 PLEKHG7Q6ZR37 379 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 CREB3L2Q70SY1 520 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 LINGO2Q7L985 606 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 SHFQ7M4L6 423 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 TSEN54Q7Z6J9 526 aaKnown RBP4.06□□□□□ -1.76
SYCP1-210ENST00000618516 ZER1Q7Z7L7 766 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 MYPOPQ86VE0 399 aaPredicted RBP4.06□□□□□ -1.76
SYCP1-210ENST00000618516 METTL25Q8N6Q8 603 aa4.06□□□□□ -1.76
SYCP1-210ENST00000618516 KBTBD8Q8NFY9 601 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms