RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 SLC22A16Q86VW1 577 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 NR2C2APQ86WQ0 139 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 MFSD8Q8NHS3 518 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 SMIM19Q96E16 107 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 MRPL48Q96GC5 212 aaKnown RBP15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 MRGPRX4Q96LA9 322 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 FOXN4Q96NZ1 517 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 ATF6BQ99941 703 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 CDCP1Q9H5V8 836 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 WDR76Q9H967 626 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 COMMD3Q9UBI1 195 aa15.62■□□□□ 0.09
PCDHGC3-205ENST00000617641 MS4A18H0YCH9 400 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 TP53I11O14683 189 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 ZNF208O43345 1280 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 CBFA2T3O75081 653 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 SC5DO75845 299 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 JMJD7P0C870 316 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 PUDPQ08623 228 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 MS4A18Q3C1V0 323 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 ACSM3Q53FZ2 586 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 SLC25A53Q5H9E4 307 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 DDI2Q5TDH0 399 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 OTPQ5XKR4 325 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 CDC20BQ86Y33 519 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 WDSUB1Q8N9V3 476 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 OR6N2Q8NGY6 317 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 OR6S1Q8NH40 331 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 CT55Q8WUE5 264 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 NXPE2Q96DL1 559 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 ADAD1Q96M93 576 aaKnown RBP15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 EML6Q6ZMW3 1958 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 TRBV2A0A0J9YWF9 115 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 IGHMP01871 453 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 OPN1LWP04000 364 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 TCN2P20062 427 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 OTX2P32243 289 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 ZNF684Q5T5D7 378 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 RPL22L1Q6P5R6 122 aaKnown RBP15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 OPN5Q6U736 354 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 TAAR9Q96RI9 348 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 PDCD1LG2Q9BQ51 273 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 TMEM185BQ9H7F4 350 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 C14orf119Q9NWQ9 140 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 TCFL5Q9UL49 500 aa15.61■□□□□ 0.09
PCDHGC3-205ENST00000617641 ISPDA4D126 451 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 OR8G3PP0DMU2 310 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 PSKH1P11801 424 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 C19orf57Q0VDD7 668 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 ZNF79Q15937 498 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 PPP1R32Q7Z5V6 425 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 PXKQ7Z7A4 578 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 MS4A15Q8N5U1 240 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 OR4K17Q8NGC6 315 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 CPNE5Q9HCH3 593 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 B9D1Q9UPM9 204 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 UGT2A1Q9Y4X1 527 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 TRIM3O75382 744 aaPredicted RBP15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 AZGP1P25311 298 aaKnown RBP15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 CENPAP49450 140 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 SSR4P51571 173 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 MFSD13AQ14CX5 517 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 H1FNTQ75WM6 255 aaPredicted RBP15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 DPY19L4Q7Z388 723 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 FADS6Q8N9I5 356 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 POC5Q8NA72 575 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 RNF166Q96A37 237 aaPredicted RBP15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 DIRAS2Q96HU8 199 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 INTS14Q96SY0 518 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 TBCCD1Q9NVR7 557 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 VSX1Q9NZR4 365 aaPredicted RBP15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 LAMP5Q9UJQ1 280 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 FKBP7Q9Y680 259 aa15.6■□□□□ 0.09
PCDHGC3-205ENST00000617641 A0A1W2PNU3 283 aaPredicted RBP15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 A0A1W2PPK0 400 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 SLC22A23A1A5C7 686 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 LIPT2A6NK58 231 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 SLC16A7O60669 478 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 DLGAP3O95886 979 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 CCL3P10147 92 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 TLE3Q04726 772 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 MADCAM1Q13477 382 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 ETFDHQ16134 617 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 CCDC58Q4VC31 144 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 RPS19BP1Q86WX3 136 aaKnown RBP15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 SCAIQ8N9R8 606 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 ZNF248Q8NDW4 579 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 SMAD5Q99717 465 aaKnown RBP15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 EDEM2Q9BV94 578 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 POTEKPQ9BYX7 375 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 TSPAN10Q9H1Z9 355 aaPredicted RBP15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 CHST11Q9NPF2 352 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 RHBDL2Q9NX52 303 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 MRM2Q9UI43 246 aaKnown RBP15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 ING1Q9UK53 422 aaPredicted RBP15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 C9orf172C9J069 976 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 TPD52L2O43399 206 aaKnown RBP15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 HPGDSO60760 199 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 RPP14O95059 124 aaKnown RBP15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 IGHEP01854 428 aa15.59■□□□□ 0.09
PCDHGC3-205ENST00000617641 HLA-DQA2P01906 255 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms