RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 TMED7Q9Y3B3 224 aa17.3■□□□□ 0.36
MMP28-204ENST00000615136 SUSD5O60279 629 aa17.29■□□□□ 0.36
MMP28-204ENST00000615136 TRIM3O75382 744 aaPredicted RBP17.29■□□□□ 0.36
MMP28-204ENST00000615136 UMODP07911 640 aa17.29■□□□□ 0.36
MMP28-204ENST00000615136 SLC25A35Q3KQZ1 300 aa17.29■□□□□ 0.36
MMP28-204ENST00000615136 FAM198BQ6UWH4 519 aa17.29■□□□□ 0.36
MMP28-204ENST00000615136 LYPD8Q6UX82 237 aa17.29■□□□□ 0.36
MMP28-204ENST00000615136 NANOGNBQ7Z5D8 188 aa17.29■□□□□ 0.36
MMP28-204ENST00000615136 GLCCI1Q86VQ1 547 aa17.29■□□□□ 0.36
MMP28-204ENST00000615136 TRMT10AQ8TBZ6 339 aaKnown RBP17.29■□□□□ 0.36
MMP28-204ENST00000615136 SLC25A36Q96CQ1 311 aa17.29■□□□□ 0.36
MMP28-204ENST00000615136 RPRD1BQ9NQG5 326 aaKnown RBP17.29■□□□□ 0.36
MMP28-204ENST00000615136 TAS2R10Q9NYW0 307 aa17.29■□□□□ 0.36
MMP28-204ENST00000615136 COPS3Q9UNS2 423 aa17.29■□□□□ 0.36
MMP28-204ENST00000615136 PMS2P1A4D2B8 440 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 CENPXA8MT69 81 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 DCTN6O00399 190 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 OR2J2O76002 312 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 LDOC1O95751 146 aaPredicted RBP17.28■□□□□ 0.36
MMP28-204ENST00000615136 PITPNBP48739 271 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 CLDN6P56747 220 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 SIRPAP78324 504 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 MC2RQ01718 297 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 TRA2AQ13595 282 aaKnown RBP eCLIP17.28■□□□□ 0.36
MMP28-204ENST00000615136 CLPPQ16740 277 aaPredicted RBP17.28■□□□□ 0.36
MMP28-204ENST00000615136 CCDC58Q4VC31 144 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 MESTQ5EB52 335 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 LINC01590Q5TEZ4 76 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 RPL22L1Q6P5R6 122 aaKnown RBP17.28■□□□□ 0.36
MMP28-204ENST00000615136 RPS4Y2Q8TD47 263 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 THAP4Q8WY91 577 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 MR1Q95460 341 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 ULBP3Q9BZM4 244 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 ZCCHC4Q9H5U6 513 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 TAS2R5Q9NYW4 299 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 MED11Q9P086 117 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 NCDNQ9UBB6 729 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 NLKQ9UBE8 527 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 MYOTQ9UBF9 498 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 LNP1A1A4G5 178 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 NPIPB7O75200 414 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 SLC43A1O75387 559 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 GATBO75879 557 aaKnown RBP17.28■□□□□ 0.36
MMP28-204ENST00000615136 UCHL1P09936 223 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 RPS11P62280 158 aaKnown RBP eCLIP17.28■□□□□ 0.36
MMP28-204ENST00000615136 HSF2Q03933 536 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 EFR3AQ14156 821 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 PCOLCEQ15113 449 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 ANGPT1Q15389 498 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 BPHLQ86WA6 291 aaPredicted RBP17.28■□□□□ 0.36
MMP28-204ENST00000615136 EXD3Q8N9H8 876 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 OR6K6Q8NGW6 343 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 RHBDD1Q8TEB9 315 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 UBASH3BQ8TF42 649 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 SNX33Q8WV41 574 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 RFT1Q96AA3 541 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 MRPL48Q96GC5 212 aaKnown RBP17.28■□□□□ 0.36
MMP28-204ENST00000615136 RNF170Q96K19 258 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 WACQ9BTA9 647 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 FKRPQ9H9S5 495 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 RANGRFQ9HD47 186 aaPredicted RBP17.28■□□□□ 0.36
MMP28-204ENST00000615136 ALG5Q9Y673 324 aa17.28■□□□□ 0.36
MMP28-204ENST00000615136 TRAV36DV7A0A075B6V5 113 aa17.27■□□□□ 0.36
MMP28-204ENST00000615136 FAM172BPA6NC97 362 aa17.27■□□□□ 0.36
MMP28-204ENST00000615136 NOTOA8MTQ0 251 aa17.27■□□□□ 0.36
MMP28-204ENST00000615136 KLF7O75840 302 aaPredicted RBP17.27■□□□□ 0.36
MMP28-204ENST00000615136 ARL6IP5O75915 188 aa17.27■□□□□ 0.36
MMP28-204ENST00000615136 PAHP00439 452 aa17.27■□□□□ 0.36
MMP28-204ENST00000615136 TFPIP10646 304 aa17.27■□□□□ 0.36
MMP28-204ENST00000615136 APEHP13798 732 aaKnown RBP17.27■□□□□ 0.36
MMP28-204ENST00000615136 SDHAP31040 664 aa17.27■□□□□ 0.36
MMP28-204ENST00000615136 POLR2HP52434 150 aaKnown RBP17.27■□□□□ 0.36
MMP28-204ENST00000615136 INPP5JQ15735 1006 aaPredicted RBP17.27■□□□□ 0.36
MMP28-204ENST00000615136 ZNF57Q68EA5 555 aaPredicted RBP17.27■□□□□ 0.36
MMP28-204ENST00000615136 ARSKQ6UWY0 536 aa17.27■□□□□ 0.36
MMP28-204ENST00000615136 DBX2Q6ZNG2 339 aa17.27■□□□□ 0.36
MMP28-204ENST00000615136 OR10G3Q8NGC4 313 aa17.27■□□□□ 0.36
MMP28-204ENST00000615136 DMRTB1Q96MA1 342 aa17.27■□□□□ 0.36
MMP28-204ENST00000615136 ACOXLQ9NUZ1 547 aa17.27■□□□□ 0.36
MMP28-204ENST00000615136 SHISA8B8ZZ34 492 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 C11orf98E9PRG8 122 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 MASP2O00187 686 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 GLCEO94923 617 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 IL11P20809 199 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 ACP1P24666 158 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 GRPRP30550 384 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 RCVRNP35243 200 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 NDUFA5Q16718 116 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 CCDC157Q569K6 752 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 HACD4Q5VWC8 232 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 PYHIN1Q6K0P9 492 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 GRINAQ7Z429 371 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 ZNF511Q8NB15 262 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 OR8K3Q8NH51 312 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 THAP7Q9BT49 309 aaPredicted RBP17.26■□□□□ 0.35
MMP28-204ENST00000615136 HDHD2Q9H0R4 259 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 WDR54Q9H977 334 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 ABRACLQ9P1F3 81 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 GNG8Q9UK08 70 aa17.26■□□□□ 0.35
MMP28-204ENST00000615136 ANKRD61A6NGH8 418 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms