RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 C19orf48Q6RUI8 117 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 TMPRSS11AQ6ZMR5 421 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ADCK1Q86TW2 530 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 GALNT16Q8N428 558 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 KLHL36Q8N4N3 616 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 EXD3Q8N9H8 876 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 POMGNT2Q8NAT1 580 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ADPRHL1Q8NDY3 354 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 OR52N1Q8NH53 320 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 SMPDL3BQ92485 455 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 DTNBP1Q96EV8 351 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 OPALINQ96PE5 141 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 SNX18Q96RF0 628 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 PIGQQ9BRB3 760 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF649Q9BS31 505 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ADGRL4Q9HBW9 690 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 FANCFQ9NPI8 374 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 RPRD1BQ9NQG5 326 aaKnown RBP8.01□□□□□ -1.13
CCDC47-207ENST00000612558 ASB6Q9NWX5 421 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 TRAPPC4Q9Y296 219 aa8.01□□□□□ -1.13
CCDC47-207ENST00000612558 RPH3AQ9Y2J0 694 aaPredicted RBP8.01□□□□□ -1.13
CCDC47-207ENST00000612558 CAB39Q9Y376 341 aaPredicted RBP8.01□□□□□ -1.13
CCDC47-207ENST00000612558 MRPS18CQ9Y3D5 142 aaKnown RBP8.01□□□□□ -1.13
CCDC47-207ENST00000612558 DMXL1Q9Y485 3027 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 A0A0G2JMM0 328 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 A0A1W2PPB8 328 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 A0A1W2PPW3 197 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 A0A1W2PRS3 328 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 DAPL1A0PJW8 107 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 ARGFXA6NJG6 315 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 NPIPB13A6NJU9 1138 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 KIR3DP1A8MWS1 328 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 NPIPB4C9JG80 1138 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 ARHGEF9O43307 516 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 AIREO43918 545 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 GLCEO94923 617 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 AKR7A3O95154 331 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 WDPCPO95876 746 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 PLGP00747 810 aaPredicted RBP8□□□□□ -1.13
CCDC47-207ENST00000612558 OR2T7P0C7T2 308 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 NR4A1P22736 598 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 GADD45AP24522 165 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 ACVR1BP36896 505 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 RAC1P63000 192 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 ACTC1P68032 377 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 ACTA1P68133 377 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 ACSM1Q08AH1 577 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 DBPQ10586 325 aaPredicted RBP8□□□□□ -1.13
CCDC47-207ENST00000612558 NFATC3Q12968 1075 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 LSAMPQ13449 338 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 AQP6Q13520 282 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 GALEQ14376 348 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 OR1C1Q15619 314 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 TIMM50Q3ZCQ8 353 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 MESTQ5EB52 335 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 ATP1A1-AS1Q5TC04 95 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 AGAP7PQ5VUJ5 663 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 RAET1LQ5VY80 246 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 PXKQ7Z7A4 578 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 VASH2Q86V25 355 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 GHDCQ8N2G8 530 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF485Q8NCK3 441 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 OR10H4Q8NGA5 316 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 OR2T4Q8NH00 348 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 OR2T27Q8NH04 317 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF519Q8TB69 540 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 ZPLD1Q8TCW7 415 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 GATAD2BQ8WXI9 593 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 RELTQ969Z4 430 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 ZMYND19Q96E35 227 aaPredicted RBP8□□□□□ -1.13
CCDC47-207ENST00000612558 AGAP4Q96P64 663 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 OR5B2Q96R09 309 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 UBL7Q96S82 380 aaPredicted RBP8□□□□□ -1.13
CCDC47-207ENST00000612558 CNN2Q99439 309 aaKnown RBP8□□□□□ -1.13
CCDC47-207ENST00000612558 FAM173AQ9BQD7 235 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 TMEM185BQ9H7F4 350 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 DEPPQ9NTK1 212 aa8□□□□□ -1.13
CCDC47-207ENST00000612558 BOKQ9UMX3 212 aaPredicted RBP8□□□□□ -1.13
CCDC47-207ENST00000612558 A0A1W2PNV4 684 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 OR2M5A3KFT3 312 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 PRSS37A4D1T9 235 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 A6NIZ1 184 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 LRRC3CA6NJW4 275 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 SULT2B1O00204 365 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 NKX2-8O15522 239 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 SEC14L5O43304 696 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 AKAP8O43823 692 aaKnown RBP7.99□□□□□ -1.13
CCDC47-207ENST00000612558 PMS2P2O95744 297 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 BCL10O95999 233 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 F10P00742 488 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 OPN1LWP04000 364 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 MRPL3P09001 348 aaKnown RBP7.99□□□□□ -1.13
CCDC47-207ENST00000612558 CPEP16870 476 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 CAPZA2P47755 286 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 DAP3P51398 398 aaKnown RBP7.99□□□□□ -1.13
CCDC47-207ENST00000612558 OR2B6P58173 313 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 RAP1BP61224 184 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 VBP1P61758 197 aa7.99□□□□□ -1.13
CCDC47-207ENST00000612558 LSM3P62310 102 aaKnown RBP7.99□□□□□ -1.13
CCDC47-207ENST00000612558 RAP1AP62834 184 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms