RNA–Protein interactions for RNA: ENST00000608108.1

CTCFL-214, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-214ENST00000608108 TXNDC15Q96J42 360 aa9.92□□□□□ -0.82
CTCFL-214ENST00000608108 TRIB1Q96RU8 372 aa9.92□□□□□ -0.82
CTCFL-214ENST00000608108 NMNAT3Q96T66 252 aa9.92□□□□□ -0.82
CTCFL-214ENST00000608108 ZNF226Q9NYT6 803 aa9.92□□□□□ -0.82
CTCFL-214ENST00000608108 KLHL9Q9P2J3 617 aa9.92□□□□□ -0.82
CTCFL-214ENST00000608108 CLCF1Q9UBD9 225 aa9.92□□□□□ -0.82
CTCFL-214ENST00000608108 AASSQ9UDR5 926 aa9.92□□□□□ -0.82
CTCFL-214ENST00000608108 KLHL21Q9UJP4 597 aa9.92□□□□□ -0.82
CTCFL-214ENST00000608108 ZNF175Q9Y473 711 aa9.92□□□□□ -0.82
CTCFL-214ENST00000608108 PCDHGB5Q9Y5G0 923 aa9.92□□□□□ -0.82
CTCFL-214ENST00000608108 AHRRA9YTQ3 701 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 H7C1C5 153 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 ARHGEF9O43307 516 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 TGM6O95932 706 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 GABRB1P18505 474 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 SLC16A1P53985 500 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 BIDP55957 195 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 CLDN17P56750 224 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 SNRPGP62308 76 aaKnown RBP9.91□□□□□ -0.82
CTCFL-214ENST00000608108 LCN6P62502 163 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 EFNB1P98172 346 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 CRMP1Q14194 572 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 RNPS1Q15287 305 aaKnown RBP9.91□□□□□ -0.82
CTCFL-214ENST00000608108 ACSF3Q4G176 576 aaPredicted RBP9.91□□□□□ -0.82
CTCFL-214ENST00000608108 FAM205BPQ63HN1 556 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 LEG1Q6P5S2 330 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 NHLRC1Q6VVB1 395 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 CREB3L2Q70SY1 520 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 HDDC2Q7Z4H3 204 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 P4HA3Q7Z4N8 544 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 ADCK1Q86TW2 530 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 MCEMP1Q8IX19 187 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 CYB561A3Q8NBI2 242 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 SLC37A3Q8NCC5 494 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 RHOXF1Q8NHV9 184 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 FAM57AQ8TBR7 257 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 TMEM163Q8TC26 289 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 CPT1CQ8TCG5 803 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 FBLIM1Q8WUP2 373 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 OTULINQ96BN8 352 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 LRR1Q96L50 414 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 EMC6Q9BV81 110 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 EMC3Q9P0I2 261 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 FLVCR1Q9Y5Y0 555 aa9.91□□□□□ -0.82
CTCFL-214ENST00000608108 IGKV3D-15A0A087WSY6 115 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 A6NIZ1 184 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 FAM183AA6NL82 134 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 FIGNL2A6NMB9 653 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 KDM4EB2RXH2 506 aaPredicted RBP9.9□□□□□ -0.82
CTCFL-214ENST00000608108 AKAP8O43823 692 aaKnown RBP9.9□□□□□ -0.82
CTCFL-214ENST00000608108 WDR1O75083 606 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 WBP4O75554 376 aaKnown RBP9.9□□□□□ -0.82
CTCFL-214ENST00000608108 EDN3P14138 238 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 PAICSP22234 425 aaKnown RBP9.9□□□□□ -0.82
CTCFL-214ENST00000608108 ACVR2AP27037 513 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 CDKN2AP42771 156 aaKnown RBP9.9□□□□□ -0.82
CTCFL-214ENST00000608108 RAP1BP61224 184 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 RAP1AP62834 184 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 RUNX1T1Q06455 604 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 ITGADQ13349 1161 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 SF3B4Q15427 424 aaKnown RBP eCLIP9.9□□□□□ -0.825e-10■□□□□ 9.4
CTCFL-214ENST00000608108 ZNF362Q5T0B9 420 aaPredicted RBP9.9□□□□□ -0.82
CTCFL-214ENST00000608108 PLBD1Q6P4A8 553 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 CXXC5Q7LFL8 322 aaKnown RBP9.9□□□□□ -0.82
CTCFL-214ENST00000608108 CPOQ8IVL8 374 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 OR6X1Q8NH79 312 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 ZNF775Q96BV0 537 aaPredicted RBP9.9□□□□□ -0.82
CTCFL-214ENST00000608108 ADAD1Q96M93 576 aaKnown RBP9.9□□□□□ -0.82
CTCFL-214ENST00000608108 ZNF385AQ96PM9 386 aaKnown RBP9.9□□□□□ -0.82
CTCFL-214ENST00000608108 KCNK17Q96T54 332 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 FN3KQ9H479 309 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 HINT3Q9NQE9 182 aaKnown RBP9.9□□□□□ -0.82
CTCFL-214ENST00000608108 DNAJC27Q9NZQ0 273 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 ING1Q9UK53 422 aaPredicted RBP9.9□□□□□ -0.82
CTCFL-214ENST00000608108 PCNX1Q96RV3 2341 aa9.9□□□□□ -0.82
CTCFL-214ENST00000608108 KMT2BQ9UMN6 2715 aaPredicted RBP9.9□□□□□ -0.83
CTCFL-214ENST00000608108 PHF3Q92576 2039 aaKnown RBP9.9□□□□□ -0.83
CTCFL-214ENST00000608108 PRSS37A4D1T9 235 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 SLC35F4A4IF30 521 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 OR6C68A6NDL8 312 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 ZNF726A6NNF4 738 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 PRR23D1E9PI22 279 aaPredicted RBP9.89□□□□□ -0.83
CTCFL-214ENST00000608108 GPR171O14626 319 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 PRRG2O14669 202 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 ATXN7O15265 892 aaPredicted RBP9.89□□□□□ -0.83
CTCFL-214ENST00000608108 SLC19A2O60779 497 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 RENP00797 406 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 IGHG1P01857 330 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 PRR23D2P0DMB1 279 aaPredicted RBP9.89□□□□□ -0.83
CTCFL-214ENST00000608108 GABRA1P14867 456 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 FMO3P31513 532 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 PTGER4P35408 488 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 RBPJQ06330 500 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 CDK5R2Q13319 367 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 CAMK2DQ13557 499 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 CARD17Q5XLA6 110 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 GTF2IRD2BQ6EKJ0 949 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 RPTNQ6XPR3 784 aa9.89□□□□□ -0.83
CTCFL-214ENST00000608108 BCDIN3DQ7Z5W3 292 aaKnown RBP9.89□□□□□ -0.83
CTCFL-214ENST00000608108 GTF2IRD2Q86UP8 949 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms