RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 NXNL2Q5VZ03 156 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 PLBD1Q6P4A8 553 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 UGT2A3Q6UWM9 527 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 P4HA3Q7Z4N8 544 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 CPOQ8IVL8 374 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 SDR9C7Q8NEX9 313 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 FNDC9Q8TBE3 224 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 FNDC8Q8TC99 324 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 APH1BQ8WW43 257 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 NMNAT3Q96T66 252 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 RNF122Q9H9V4 155 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 GP6Q9HCN6 339 aa16.56■□□□□ 0.24
SSBP4-212ENST00000601919 HINT3Q9NQE9 182 aaKnown RBP16.56■□□□□ 0.24
SSBP4-212ENST00000601919 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.56■□□□□ 0.24
SSBP4-212ENST00000601919 TPRP12270 2363 aaKnown RBP16.56■□□□□ 0.24
SSBP4-212ENST00000601919 GTF3C1Q12789 2109 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 IGKV3D-15A0A087WSY6 115 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 PRSS37A4D1T9 235 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 FIGNL2A6NMB9 653 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 ZNF716A6NP11 495 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 KDM4EB2RXH2 506 aaPredicted RBP16.55■□□□□ 0.24
SSBP4-212ENST00000601919 PRODHO43272 600 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 WDR1O75083 606 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 IGHG1P01857 330 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 HOXD4P09016 255 aaPredicted RBP16.55■□□□□ 0.24
SSBP4-212ENST00000601919 ABOP16442 354 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 KLK2P20151 261 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 FMO3P31513 532 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 TDGF1P3P51864 188 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 SLC25A1P53007 311 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 CLDN17P56750 224 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 RBPJQ06330 500 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 TMED1Q13445 227 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 LY6DQ14210 128 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 MELKQ14680 651 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 MESTQ5EB52 335 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 ZNF362Q5T0B9 420 aaPredicted RBP16.55■□□□□ 0.24
SSBP4-212ENST00000601919 NHLRC1Q6VVB1 395 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 NPEPL1Q8NDH3 523 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 ZNF566Q969W8 418 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 SLC25A44Q96H78 314 aaPredicted RBP16.55■□□□□ 0.24
SSBP4-212ENST00000601919 TXNDC15Q96J42 360 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 ZNF582Q96NG8 517 aaPredicted RBP16.55■□□□□ 0.24
SSBP4-212ENST00000601919 ALG12Q9BV10 488 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 CALHM2Q9HA72 323 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 GLRX2Q9NS18 164 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 PLCXD1Q9NUJ7 323 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 MED29Q9NX70 200 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 DNAJC27Q9NZQ0 273 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 RCE1Q9Y256 329 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 TPRKBQ9Y3C4 175 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 RPL36Q9Y3U8 105 aaKnown RBP16.55■□□□□ 0.24
SSBP4-212ENST00000601919 PIEZO2Q9H5I5 2752 aa16.55■□□□□ 0.24
SSBP4-212ENST00000601919 ZNF724A8MTY0 619 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 SLC1A7O00341 560 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 FAM20BO75063 409 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 ENTPD6O75354 484 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 WISP2O76076 250 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 CDKN2AP42771 156 aaKnown RBP16.54■□□□□ 0.24
SSBP4-212ENST00000601919 CLRN1P58418 232 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 AADACL4Q5VUY2 407 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 DNM1P34Q6PK57 102 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 GFRALQ6UXV0 394 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 ADGRE4PQ86SQ3 457 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 CYB561A3Q8NBI2 242 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 BPIFB6Q8NFQ5 453 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 OR5M9Q8NGP3 310 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 OR2T4Q8NH00 348 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 ABHD3Q8WU67 409 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 TRIB1Q96RU8 372 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 ASF1BQ9NVP2 202 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 PARPBPQ9NWS1 579 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 VSX1Q9NZR4 365 aaPredicted RBP16.54■□□□□ 0.24
SSBP4-212ENST00000601919 CLCF1Q9UBD9 225 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 AASSQ9UDR5 926 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 PCDHGB5Q9Y5G0 923 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 FLVCR1Q9Y5Y0 555 aa16.54■□□□□ 0.24
SSBP4-212ENST00000601919 SVILO95425 2214 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 MAP1BP46821 2468 aaKnown RBP16.53■□□□□ 0.24
SSBP4-212ENST00000601919 IRGMA1A4Y4 181 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 SLC35F4A4IF30 521 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 OR6C68A6NDL8 312 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 SLC22A31A6NKX4 558 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 FAM183AA6NL82 134 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 PRRG2O14669 202 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 TRMUO75648 421 aaKnown RBP16.53■□□□□ 0.24
SSBP4-212ENST00000601919 AQP8O94778 261 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 TPOP07202 933 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 EDN3P14138 238 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 CRABP1P29762 137 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 CDH11P55287 796 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 SLC35D3Q5M8T2 416 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 LCN1P1Q5VSP4 162 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 ZNF585AQ6P3V2 769 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 NIPAL3Q6P499 406 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 FAM57AQ8TBR7 257 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 IPCEF1Q8WWN9 437 aaPredicted RBP16.53■□□□□ 0.24
SSBP4-212ENST00000601919 PTP4A1Q93096 173 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 WNT2BQ93097 391 aa16.53■□□□□ 0.24
SSBP4-212ENST00000601919 TMEM45BQ96B21 275 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms