RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 Q96M85 177 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 OR2M2Q96R28 347 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 NRIP3Q9NQ35 241 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 PAPOLBQ9NRJ5 636 aaKnown RBP17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 IER3IP1Q9Y5U9 82 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 ALPK2Q86TB3 2170 aa17.71■□□□□ 0.43
SHKBP1-222ENST00000600320 FREM1Q5H8C1 2179 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 NPIPB13A6NJU9 1138 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 NPIPB4C9JG80 1138 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 AGFG2O95081 481 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 CD8BP10966 210 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 PEX2P28328 305 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 RPL27P61353 136 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 CAMK2DQ13557 499 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 TSPO2Q5TGU0 170 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 CARD17Q5XLA6 110 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 RPL13AP3Q6NVV1 102 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 ZNF474Q6S9Z5 364 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 ZNF100Q8IYN0 542 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 ZNF808Q8N4W9 903 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 OR6X1Q8NH79 312 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 LILRB4Q8NHJ6 448 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 ZNF519Q8TB69 540 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 MAGEE2Q8TD90 523 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 DNAJC9Q8WXX5 260 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 APH1AQ96BI3 265 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 RBM4BQ9BQ04 359 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 C9orf16Q9BUW7 83 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 RBM4Q9BWF3 364 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 TSSK6Q9BXA6 273 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 NDEL1Q9GZM8 345 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 PIGMQ9H3S5 423 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 KRT84Q9NSB2 600 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 TBC1D23Q9NUY8 699 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 USE1Q9NZ43 259 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 JKAMPQ9P055 326 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 POFUT2Q9Y2G5 429 aa17.7■□□□□ 0.42
SHKBP1-222ENST00000600320 WIPF3A6NGB9 483 aa17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 EEF1E1-BLOC1S5C9J1V9 151 aa17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 CASQ2O14958 399 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 EEF1E1O43324 174 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 AKAP8O43823 692 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 UPK3AO75631 287 aa17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 TRMUO75648 421 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 ALPLP05186 524 aa17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 IGFBP5P24593 272 aa17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 DAP3P51398 398 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 PHYHD1Q5SRE7 291 aa17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 LUZP2Q86TE4 346 aa17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 PARP8Q8N3A8 854 aa17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 IQCF1Q8N6M8 205 aa17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 HDAC2Q92769 488 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 EME1Q96AY2 570 aa17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 RASD2Q96D21 266 aa17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 IFT27Q9BW83 186 aa17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 SLC7A10Q9NS82 523 aa17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 PARPBPQ9NWS1 579 aa17.69■□□□□ 0.42
SHKBP1-222ENST00000600320 TEX13CA0A0J9YWL9 993 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 NKX2-6A6NCS4 301 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 ZNF726A6NNF4 738 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 A8MXE2 369 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 H3BN98 237 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 BHLHE40O14503 412 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 MSTNO14793 375 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 AGAP20933 346 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 POU1F1P28069 291 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 ACVR1BP36896 505 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 SLC34A1Q06495 639 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 RIPK1Q13546 671 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 TAF11Q15544 211 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 LRRC36Q1X8D7 754 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 SLC25A35Q3KQZ1 300 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 XKRXQ6PP77 449 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 ZBTB49Q6ZSB9 765 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 LINGO2Q7L985 606 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 C20orf196Q8IYI0 205 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 FAM26EQ8N5C1 309 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 ARIH2OSQ8N7S6 290 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 OR52L1Q8NGH7 329 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 ADAD1Q96M93 576 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 ZNF570Q96NI8 536 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 ERMAPQ96PL5 475 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 SLCO5A1Q9H2Y9 848 aa17.68■□□□□ 0.42
SHKBP1-222ENST00000600320 RELNP78509 3460 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 IMPA2O14732 288 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 ARPC3O15145 178 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 SLC43A1O75387 559 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 ATP6V1G2O95670 118 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 TXNDC12O95881 172 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 PGA4P0DJD7 388 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 PGA3P0DJD8 388 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 APEHP13798 732 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 ACADSP16219 412 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 EPHA2P29317 976 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 POLR2IP36954 125 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 ALDH3A2P51648 485 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 RPS6KA3P51812 740 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 CRISP1P54107 249 aa17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 FOXG1P55316 489 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-222ENST00000600320 MESTQ5EB52 335 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms