RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 HIF3AQ9Y2N7 669 aa14.17□□□□□ -0.14
LSM4-206ENST00000600289 A0A1W2PRQ8 180 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 CENPBD1B2RD01 187 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 RNF13O43567 381 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 TMCC2O75069 709 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 UMPSP11172 480 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 IFNGR1P15260 489 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 RHCEP18577 417 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 TCN1P20061 433 aaPredicted RBP14.16□□□□□ -0.14
LSM4-206ENST00000600289 PTAFRP25105 342 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 HOXC12P31275 282 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 YAP1P46937 504 aaKnown RBP14.16□□□□□ -0.14
LSM4-206ENST00000600289 PRPS1P60891 318 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 RPS4XP62701 263 aaKnown RBP14.16□□□□□ -0.14
LSM4-206ENST00000600289 PRKCDQ05655 676 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 RPL18Q07020 188 aaKnown RBP14.16□□□□□ -0.14
LSM4-206ENST00000600289 DGCR6Q14129 220 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 KEAP1Q14145 624 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 C3orf36Q3SXR2 165 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 IQCCQ4KMZ1 466 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 MTX3Q5HYI7 312 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 C9orf135Q5VTT2 229 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 KLHL17Q6TDP4 642 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 SLC35D2Q76EJ3 337 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 ZNF627Q7L945 461 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 BIVMQ86UB2 503 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 FAM86B1Q8N7N1 296 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 ZNF611Q8N823 705 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 OR52N5Q8NH56 324 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 BCL2L2Q92843 193 aaPredicted RBP14.16□□□□□ -0.14
LSM4-206ENST00000600289 BPIFA2Q96DR5 249 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 PYURFQ96I23 114 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 TXNDC15Q96J42 360 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 RADILQ96JH8 1075 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 DHRS1Q96LJ7 313 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 NSMCE2Q96MF7 247 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 NELFAQ9H3P2 528 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 NMNAT1Q9HAN9 279 aaPredicted RBP14.16□□□□□ -0.14
LSM4-206ENST00000600289 BEX4Q9NWD9 120 aaPredicted RBP14.16□□□□□ -0.14
LSM4-206ENST00000600289 RHCGQ9UBD6 479 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 PRPF19Q9UMS4 504 aaKnown RBP14.16□□□□□ -0.14
LSM4-206ENST00000600289 MGAT4BQ9UQ53 548 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 ATRQ13535 2644 aa14.16□□□□□ -0.14
LSM4-206ENST00000600289 A0A087WUU8 490 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 ZNF726A6NNF4 738 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 C11orf98E9PRG8 122 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 HS3ST1O14792 307 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 PIP5K1CO60331 668 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 WNT11O96014 354 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 PLAUP00749 431 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 ITGA2P17301 1181 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 FUT4P22083 530 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 SLC9A3P48764 834 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 VLDLRP98155 873 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 DEFB113Q30KQ7 82 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 TBRG1Q3YBR2 411 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 PHYHD1Q5SRE7 291 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 KLHL24Q6TFL4 600 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 TMEM108Q6UXF1 575 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 MBOAT2Q6ZWT7 520 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 TRPM8Q7Z2W7 1104 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 HDDC2Q7Z4H3 204 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 WDFY1Q8IWB7 410 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 FAM169BQ8N8A8 192 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 LILRB1Q8NHL6 650 aaPredicted RBP14.15□□□□□ -0.14
LSM4-206ENST00000600289 TMEM54Q969K7 222 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 PIGTQ969N2 578 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 SEPHS2Q99611 448 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 EMC6Q9BV81 110 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 UBTD1Q9HAC8 227 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 CRLF2Q9HC73 371 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 B3GAT2Q9NPZ5 323 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 ACTR3BQ9P1U1 418 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 MXRA5Q9NR99 2828 aa14.15□□□□□ -0.14
LSM4-206ENST00000600289 ZNF99A8MXY4 864 aaPredicted RBP14.14□□□□□ -0.15
LSM4-206ENST00000600289 H1F0P07305 194 aaKnown RBP14.14□□□□□ -0.15
LSM4-206ENST00000600289 IFI30P13284 250 aa14.14□□□□□ -0.15
LSM4-206ENST00000600289 BIDP55957 195 aa14.14□□□□□ -0.15
LSM4-206ENST00000600289 CEACAM16Q2WEN9 425 aa14.14□□□□□ -0.15
LSM4-206ENST00000600289 ZNF672Q499Z4 452 aaPredicted RBP14.14□□□□□ -0.15
LSM4-206ENST00000600289 HIKESHIQ53FT3 197 aa14.14□□□□□ -0.15
LSM4-206ENST00000600289 ALKBH2Q6NS38 261 aa14.14□□□□□ -0.15
LSM4-206ENST00000600289 RINLQ6ZS11 566 aa14.14□□□□□ -0.15
LSM4-206ENST00000600289 TMPRSS11FQ6ZWK6 438 aa14.14□□□□□ -0.15
LSM4-206ENST00000600289 NRMQ8IXM6 262 aa14.14□□□□□ -0.15
LSM4-206ENST00000600289 CCDC36Q8IYA8 594 aa14.14□□□□□ -0.15
LSM4-206ENST00000600289 SLC7A13Q8TCU3 470 aa14.14□□□□□ -0.15
LSM4-206ENST00000600289 POP5Q969H6 163 aaKnown RBP14.14□□□□□ -0.15
LSM4-206ENST00000600289 SLC25A44Q96H78 314 aaPredicted RBP14.14□□□□□ -0.15
LSM4-206ENST00000600289 STX18Q9P2W9 335 aaKnown RBP14.14□□□□□ -0.15
LSM4-206ENST00000600289 CRNNQ9UBG3 495 aaPredicted RBP14.14□□□□□ -0.15
LSM4-206ENST00000600289 TMEM5Q9Y2B1 443 aa14.14□□□□□ -0.15
LSM4-206ENST00000600289 FAM32AQ9Y421 112 aaKnown RBP14.14□□□□□ -0.15
LSM4-206ENST00000600289 A0A1W2PRG6 482 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 SHISA9B4DS77 424 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 BLOC1S5-TXNDC5H3BN57 136 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 M0R3G1 203 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 IGHMP01871 453 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 PGA4P0DJD7 388 aa14.13□□□□□ -0.15
LSM4-206ENST00000600289 PGA3P0DJD8 388 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms