RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 WDR55Q9H6Y2 383 aaPredicted RBP8.53□□□□□ -1.04
LIG1-209ENST00000596104 MED29Q9NX70 200 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 POFUT2Q9Y2G5 429 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 NOX1Q9Y5S8 564 aa8.53□□□□□ -1.04
LIG1-209ENST00000596104 TM9SF1O15321 606 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 DEAF1O75398 565 aaPredicted RBP8.52□□□□□ -1.05
LIG1-209ENST00000596104 IL6P05231 212 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 NAT2P11245 290 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 EPHA3P29320 983 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 MAGEB1P43366 347 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 LIMS1P48059 325 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 RAB1AP62820 205 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 STX3Q13277 289 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 RAB39AQ14964 217 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 PDCD4Q53EL6 469 aaKnown RBP8.52□□□□□ -1.05
LIG1-209ENST00000596104 AWAT1Q58HT5 328 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 ALG10BQ5I7T1 473 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 GKAP1Q5VSY0 366 aaPredicted RBP8.52□□□□□ -1.05
LIG1-209ENST00000596104 ACSM5Q6NUN0 579 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 C1QL2Q7Z5L3 287 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 TEX29Q8N6K0 151 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 ZDHHC22Q8N966 263 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 FGFBP3Q8TAT2 258 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 MAL2Q969L2 176 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 JMJD8Q96S16 334 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 FOXB1Q99853 325 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 ULBP2Q9BZM5 246 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 ZNF665Q9H7R5 613 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 CACYBPQ9HB71 228 aaKnown RBP8.52□□□□□ -1.05
LIG1-209ENST00000596104 SSU72Q9NP77 194 aaKnown RBP8.52□□□□□ -1.05
LIG1-209ENST00000596104 A4GALTQ9NPC4 353 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 B3GAT2Q9NPZ5 323 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 ESM1Q9NQ30 184 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 THUMPD1Q9NXG2 353 aaKnown RBP8.52□□□□□ -1.05
LIG1-209ENST00000596104 RPS6KB2Q9UBS0 482 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 SLC7A8Q9UHI5 535 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 DUSP13Q9UII6 198 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 ZNF346Q9UL40 294 aaKnown RBP8.52□□□□□ -1.05
LIG1-209ENST00000596104 CORINQ9Y5Q5 1042 aa8.52□□□□□ -1.05
LIG1-209ENST00000596104 DYSFO75923 2080 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 IGLV3-9A0A075B6K5 115 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 A0A1W2PPW3 197 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 TMEM247A6NEH6 219 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 C17orf100A8MU93 164 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 HDAC3O15379 428 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 PLPP2O43688 288 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 SLC22A3O75751 556 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 UBL3O95164 117 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 MPZL1O95297 269 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 RAB36O95755 333 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 CLPTM1O96005 669 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 BGLAPP02818 100 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 SERPINA5P05154 406 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 PATE4P0C8F1 98 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 IDO1P14902 403 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 ETS2P15036 469 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 ANPEPP15144 967 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 NQO1P15559 274 aaKnown RBP8.51□□□□□ -1.05
LIG1-209ENST00000596104 HOXB9P17482 250 aaPredicted RBP8.51□□□□□ -1.05
LIG1-209ENST00000596104 PRKAR1BP31321 381 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 GALK2Q01415 458 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 PUDPQ08623 228 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 CAMK2DQ13557 499 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 RGNQ15493 299 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 ALKBH6Q3KRA9 238 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 PRR31Q5SQ13 230 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 WDR88Q6ZMY6 472 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 MSANTD1Q6ZTZ1 278 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 SKA3Q8IX90 412 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 SCAIQ8N9R8 606 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 OR6N1Q8NGY5 312 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 BBS10Q8TAM1 723 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 MGARPQ8TDB4 240 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 AENQ8WTP8 325 aaKnown RBP8.51□□□□□ -1.05
LIG1-209ENST00000596104 DNAJA4Q8WW22 397 aaPredicted RBP8.51□□□□□ -1.05
LIG1-209ENST00000596104 ITCHQ96J02 903 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 MOGAT1Q96PD6 335 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 TSPAN32Q96QS1 320 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 SLC6A7Q99884 636 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 SUCNR1Q9BXA5 334 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 PAIP1Q9H074 479 aaKnown RBP8.51□□□□□ -1.05
LIG1-209ENST00000596104 SLC52A3Q9NQ40 469 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 HINT3Q9NQE9 182 aaKnown RBP8.51□□□□□ -1.05
LIG1-209ENST00000596104 SDR39U1Q9NRG7 319 aaPredicted RBP8.51□□□□□ -1.05
LIG1-209ENST00000596104 MRPL39Q9NYK5 338 aaKnown RBP8.51□□□□□ -1.05
LIG1-209ENST00000596104 NKIRAS2Q9NYR9 191 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 TAAR3PQ9P1P4 343 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 FBXL3Q9UKT7 428 aa8.51□□□□□ -1.05
LIG1-209ENST00000596104 A0A0G2JMP0 313 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 A0A0X1KG70 313 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 LRRN3E7EW58 273 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 J3QLI3 93 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 PLPP3O14495 311 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 TMPRSS2O15393 492 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 TPST1O60507 370 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 CDC14BO60729 498 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 ANP32DO95626 131 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 FSHBP01225 129 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 ZNF250P15622 560 aa8.5□□□□□ -1.05
LIG1-209ENST00000596104 ADRA2CP18825 462 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms