RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 PRAMEF2O60811 474 aa15.02□□□□□ -0.01
LIG1-206ENST00000594067 GUSBP08236 651 aa15.02□□□□□ -0.01
LIG1-206ENST00000594067 RNH1P13489 461 aaKnown RBP15.02□□□□□ -0.01
LIG1-206ENST00000594067 CDK2P24941 298 aa15.02□□□□□ -0.01
LIG1-206ENST00000594067 PRPS1P60891 318 aa15.02□□□□□ -0.01
LIG1-206ENST00000594067 RAP2BP61225 183 aa15.02□□□□□ -0.01
LIG1-206ENST00000594067 LCN6P62502 163 aa15.02□□□□□ -0.01
LIG1-206ENST00000594067 ELOA3BQ3SY89 546 aa15.02□□□□□ -0.01
LIG1-206ENST00000594067 ARMC6Q6NXE6 501 aa15.02□□□□□ -0.01
LIG1-206ENST00000594067 STAC2Q6ZMT1 411 aa15.02□□□□□ -0.01
LIG1-206ENST00000594067 MCATQ8IVS2 390 aaKnown RBP15.02□□□□□ -0.01
LIG1-206ENST00000594067 ARHGEF39Q8N4T4 335 aa15.02□□□□□ -0.01
LIG1-206ENST00000594067 ELOA3Q8NG57 546 aa15.02□□□□□ -0.01
LIG1-206ENST00000594067 MOGAT1Q96PD6 335 aa15.02□□□□□ -0.01
LIG1-206ENST00000594067 TCF7L1Q9HCS4 588 aa15.02□□□□□ -0.01
LIG1-206ENST00000594067 HEATR5AQ86XA9 2040 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 FAM221BA6H8Z2 402 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 TVP23AA6NH52 213 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 ATP6V1G2-DDX39BF2Z307 99 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 OIP5O43482 229 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 CTNSO60931 367 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 F13BP05160 661 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 DCTDP32321 178 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 GRK6P43250 576 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 P2RX1P51575 399 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 PSMD4P55036 377 aaKnown RBP15.01□□□□□ -0.01
LIG1-206ENST00000594067 CTXN1P60606 82 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 YPEL5P62699 121 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 LIPNQ5VXI9 398 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 OLFML2AQ68BL7 652 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 ZNF626Q68DY1 528 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 EID2Q8N6I1 236 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 LSM14AQ8ND56 463 aaKnown RBP15.01□□□□□ -0.01
LIG1-206ENST00000594067 UTP23Q9BRU9 249 aaKnown RBP15.01□□□□□ -0.01
LIG1-206ENST00000594067 OR10A5Q9H207 317 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 MRM2Q9UI43 246 aaKnown RBP15.01□□□□□ -0.01
LIG1-206ENST00000594067 TP53BP1Q12888 1972 aaPredicted RBP15.01□□□□□ -0.01
LIG1-206ENST00000594067 EPOPA6NHQ4 379 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 SUSD5O60279 629 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 CREBL2O60519 120 aaPredicted RBP15.01□□□□□ -0.01
LIG1-206ENST00000594067 TMIGD3P0DMS9 266 aaPredicted RBP15.01□□□□□ -0.01
LIG1-206ENST00000594067 ADRA2CP18825 462 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 GPR3P46089 330 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 HHEXQ03014 270 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 IL10RAQ13651 578 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 HLXQ14774 488 aaPredicted RBP15.01□□□□□ -0.01
LIG1-206ENST00000594067 NHLRC1Q6VVB1 395 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 PARGQ86W56 976 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 SEMA6CQ9H3T2 930 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 CLDN16Q9Y5I7 305 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 SPTBN5Q9NRC6 3674 aaKnown RBP15.01□□□□□ -0.01
LIG1-206ENST00000594067 SPTBP11277 2137 aa15.01□□□□□ -0.01
LIG1-206ENST00000594067 A0A1B0GTQ1 180 aa15□□□□□ -0.01
LIG1-206ENST00000594067 A8MXK9 166 aa15□□□□□ -0.01
LIG1-206ENST00000594067 DCTN6O00399 190 aa15□□□□□ -0.01
LIG1-206ENST00000594067 SULT1B1O43704 296 aa15□□□□□ -0.01
LIG1-206ENST00000594067 UPK3AO75631 287 aa15□□□□□ -0.01
LIG1-206ENST00000594067 IFNA16P05015 189 aa15□□□□□ -0.01
LIG1-206ENST00000594067 LPLP06858 475 aa15□□□□□ -0.01
LIG1-206ENST00000594067 RPS27P42677 84 aaKnown RBP15□□□□□ -0.01
LIG1-206ENST00000594067 PLA2G7Q13093 441 aa15□□□□□ -0.01
LIG1-206ENST00000594067 CD226Q15762 336 aa15□□□□□ -0.01
LIG1-206ENST00000594067 ALKAL2Q6UX46 152 aa15□□□□□ -0.01
LIG1-206ENST00000594067 OVCH2Q7RTZ1 564 aa15□□□□□ -0.01
LIG1-206ENST00000594067 FAM220AQ7Z4H9 259 aa15□□□□□ -0.01
LIG1-206ENST00000594067 C19orf47Q8N9M1 422 aaKnown RBP15□□□□□ -0.01
LIG1-206ENST00000594067 OR5AK2Q8NH90 309 aa15□□□□□ -0.01
LIG1-206ENST00000594067 TAS2R10Q9NYW0 307 aa15□□□□□ -0.01
LIG1-206ENST00000594067 FRRS1LQ9P0K9 344 aa15□□□□□ -0.01
LIG1-206ENST00000594067 KNL1Q8NG31 2342 aa15□□□□□ -0.01
LIG1-206ENST00000594067 TICRRQ7Z2Z1 1910 aa15□□□□□ -0.01
LIG1-206ENST00000594067 IL5P05113 134 aa15□□□□□ -0.01
LIG1-206ENST00000594067 MECP2P51608 486 aaKnown RBP15□□□□□ -0.01
LIG1-206ENST00000594067 ALKBH1Q13686 389 aaKnown RBP15□□□□□ -0.01
LIG1-206ENST00000594067 ISXQ2M1V0 245 aa15□□□□□ -0.01
LIG1-206ENST00000594067 ODF4Q2M2E3 257 aa15□□□□□ -0.01
LIG1-206ENST00000594067 Q499Y3 187 aa15□□□□□ -0.01
LIG1-206ENST00000594067 SLC16A9Q7RTY1 509 aa15□□□□□ -0.01
LIG1-206ENST00000594067 COQ8AQ8NI60 647 aa15□□□□□ -0.01
LIG1-206ENST00000594067 GPX7Q96SL4 187 aaPredicted RBP15□□□□□ -0.01
LIG1-206ENST00000594067 MS4A7Q9GZW8 240 aaPredicted RBP15□□□□□ -0.01
LIG1-206ENST00000594067 IKZF2Q9UKS7 526 aa15□□□□□ -0.01
LIG1-206ENST00000594067 MRPS33Q9Y291 106 aaKnown RBP15□□□□□ -0.01
LIG1-206ENST00000594067 KIR2DS5A0A0G2JLQ3 304 aa15□□□□□ -0.01
LIG1-206ENST00000594067 A0A0G2JNG1 304 aa15□□□□□ -0.01
LIG1-206ENST00000594067 SLC22A23A1A5C7 686 aa15□□□□□ -0.01
LIG1-206ENST00000594067 POM121CA8CG34 1229 aa15□□□□□ -0.01
LIG1-206ENST00000594067 SNRPGP15A8MWD9 76 aa15□□□□□ -0.01
LIG1-206ENST00000594067 KIR2DS3K7RE56 304 aa15□□□□□ -0.01
LIG1-206ENST00000594067 B3GALNT1O75752 331 aa15□□□□□ -0.01
LIG1-206ENST00000594067 MAS1P04201 325 aa15□□□□□ -0.01
LIG1-206ENST00000594067 PROS1P07225 676 aa15□□□□□ -0.01
LIG1-206ENST00000594067 CD14P08571 375 aa15□□□□□ -0.01
LIG1-206ENST00000594067 ART1P52961 327 aa15□□□□□ -0.01
LIG1-206ENST00000594067 KIR2DS5Q14953 304 aa15□□□□□ -0.01
LIG1-206ENST00000594067 CSRP2Q16527 193 aa15□□□□□ -0.01
LIG1-206ENST00000594067 ZNF74Q16587 644 aa15□□□□□ -0.01
LIG1-206ENST00000594067 ALG10Q5BKT4 473 aa15□□□□□ -0.01
LIG1-206ENST00000594067 SLC6A19Q695T7 634 aa15□□□□□ -0.01
LIG1-206ENST00000594067 CBLN3Q6UW01 205 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms