RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 UCK2Q9BZX2 261 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 OR11A1Q9GZK7 315 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 REEP1Q9H902 201 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 TMEM27Q9HBJ8 222 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 KCNJ16Q9NPI9 418 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 POLE4Q9NR33 117 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 ABCB10Q9NRK6 738 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 POU2F3Q9UKI9 436 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 HDGFL3Q9Y3E1 203 aa17.53■□□□□ 0.4
LSM4-203ENST00000593829 SAMHD1Q9Y3Z3 626 aaKnown RBP17.53■□□□□ 0.4
LSM4-203ENST00000593829 FAM90A27PA6NNH2 459 aa17.52■□□□□ 0.4
LSM4-203ENST00000593829 SULT2B1O00204 365 aa17.52■□□□□ 0.4
LSM4-203ENST00000593829 CRHP06850 196 aa17.52■□□□□ 0.4
LSM4-203ENST00000593829 LIPAP38571 399 aa17.52■□□□□ 0.4
LSM4-203ENST00000593829 CSNK2A1P68400 391 aaPredicted RBP17.52■□□□□ 0.4
LSM4-203ENST00000593829 FOXF2Q12947 444 aa17.52■□□□□ 0.4
LSM4-203ENST00000593829 ZNF239Q16600 458 aaKnown RBP17.52■□□□□ 0.4
LSM4-203ENST00000593829 IQCCQ4KMZ1 466 aa17.52■□□□□ 0.4
LSM4-203ENST00000593829 EEF1A1P5Q5VTE0 462 aa17.52■□□□□ 0.4
LSM4-203ENST00000593829 POC5Q8NA72 575 aa17.52■□□□□ 0.4
LSM4-203ENST00000593829 DNAJA4Q8WW22 397 aaPredicted RBP17.52■□□□□ 0.4
LSM4-203ENST00000593829 ARL5BQ96KC2 179 aa17.52■□□□□ 0.4
LSM4-203ENST00000593829 RHNO1Q9BSD3 238 aa17.52■□□□□ 0.4
LSM4-203ENST00000593829 SFXN3Q9BWM7 321 aa17.52■□□□□ 0.4
LSM4-203ENST00000593829 PRR14Q9BWN1 585 aa17.52■□□□□ 0.4
LSM4-203ENST00000593829 KIF17Q9P2E2 1029 aa17.52■□□□□ 0.4
LSM4-203ENST00000593829 SLC9A8Q9Y2E8 581 aa17.52■□□□□ 0.4
LSM4-203ENST00000593829 PRSS44E7EML9 344 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 FMO6PO60774 539 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 DIO1P49895 249 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 VLDLRP98155 873 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 MYBPHQ13203 477 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 AHSA2Q719I0 299 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 ATG4DQ86TL0 474 aaPredicted RBP17.51■□□□□ 0.39
LSM4-203ENST00000593829 ATG16L2Q8NAA4 619 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 OR6T1Q8NGN1 323 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 COPS4Q9BT78 406 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 C12orf10Q9HB07 376 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 AASSQ9UDR5 926 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 PEX16Q9Y5Y5 336 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 UTP20O75691 2785 aaKnown RBP17.51■□□□□ 0.39
LSM4-203ENST00000593829 A0A1B0GWA3 101 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 TPST2O60704 377 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 CDK1P06493 297 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 AGFG1P52594 562 aaKnown RBP17.51■□□□□ 0.39
LSM4-203ENST00000593829 OR1Q1Q15612 314 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 ULK3Q6PHR2 472 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 VANGL1Q8TAA9 524 aaPredicted RBP17.51■□□□□ 0.39
LSM4-203ENST00000593829 ROBO4Q8WZ75 1007 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 DOCK7Q96N67 2140 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 MCHR1Q99705 422 aa17.51■□□□□ 0.39
LSM4-203ENST00000593829 SPTAN1Q13813 2472 aaKnown RBP17.5■□□□□ 0.39
LSM4-203ENST00000593829 A0A1W2PNV4 684 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 NKX2-6A6NCS4 301 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 ELOA3DA6NLF2 546 aaPredicted RBP17.5■□□□□ 0.39
LSM4-203ENST00000593829 A8MVM7 634 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 TBX1O43435 398 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 PMS2P2O95744 297 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 GGT2P36268 569 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 IL1RL1Q01638 556 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 ELOA3BQ3SY89 546 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 ALG10BQ5I7T1 473 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 FCRLAQ7L513 359 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 P3H2Q8IVL5 708 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 ELOA3Q8NG57 546 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 ZNF486Q96H40 463 aaPredicted RBP17.5■□□□□ 0.39
LSM4-203ENST00000593829 CDADC1Q9BWV3 514 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 POTEKPQ9BYX7 375 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 TRAPPC4Q9Y296 219 aa17.5■□□□□ 0.39
LSM4-203ENST00000593829 SPTBN1Q01082 2364 aaKnown RBP17.5■□□□□ 0.39
LSM4-203ENST00000593829 PNMA8CA0A1B0GUJ8 204 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 ZC3H12DA2A288 527 aaKnown RBP17.49■□□□□ 0.39
LSM4-203ENST00000593829 PLGP00747 810 aaPredicted RBP17.49■□□□□ 0.39
LSM4-203ENST00000593829 PNMTP11086 282 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 ENPP1P22413 925 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 EPHA2P29317 976 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 S100A5P33763 92 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 SELENOWP63302 87 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 LAPTM4AQ15012 233 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 TIGD6Q17RP2 521 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 RBM45Q8IUH3 476 aaKnown RBP17.49■□□□□ 0.39
LSM4-203ENST00000593829 MCEMP1Q8IX19 187 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 CNEP1R1Q8N9A8 125 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 RELL2Q8NC24 303 aaPredicted RBP17.49■□□□□ 0.39
LSM4-203ENST00000593829 OR4D11Q8NGI4 311 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 RNF128Q8TEB7 428 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 GMPPAQ96IJ6 420 aaPredicted RBP17.49■□□□□ 0.39
LSM4-203ENST00000593829 HSH2DQ96JZ2 352 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 C7orf34Q96L11 122 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 CHST11Q9NPF2 352 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 GLRX2Q9NS18 164 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 ADPRHL2Q9NX46 363 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 A0A0B4J2E0 115 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 A0A1B0GX12 115 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 TMEM229AB2RXF0 380 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 hCG_2039718K7EN88 272 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 TNFSF13O75888 250 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 GADD45AP24522 165 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 DEFA1P59665 94 aa17.49■□□□□ 0.39
LSM4-203ENST00000593829 DEFA3P59666 94 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms