RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 PAGE3Q5JUK9 113 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 SWT1Q5T5J6 900 aaKnown RBP20.62■□□□□ 0.89
LSM4-202ENST00000593564 LIPNQ5VXI9 398 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 UGT2A3Q6UWM9 527 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 SNX32Q86XE0 403 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 C1orf159Q96HA4 380 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 MS4A3Q96HJ5 214 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 TXNDC15Q96J42 360 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 MOGAT1Q96PD6 335 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 ZNF607Q96SK3 696 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 TMEM43Q9BTV4 400 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 EVA1AQ9H8M9 152 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 SPEF1Q9Y4P9 236 aa20.62■□□□□ 0.89
LSM4-202ENST00000593564 SYNGR3O43761 229 aa20.61■□□□□ 0.89
LSM4-202ENST00000593564 TPST2O60704 377 aa20.61■□□□□ 0.89
LSM4-202ENST00000593564 GPX2P18283 190 aa20.61■□□□□ 0.89
LSM4-202ENST00000593564 SLC6A2P23975 617 aa20.61■□□□□ 0.89
LSM4-202ENST00000593564 CDH15P55291 814 aa20.61■□□□□ 0.89
LSM4-202ENST00000593564 MSMPQ1L6U9 139 aa20.61■□□□□ 0.89
LSM4-202ENST00000593564 PXKQ7Z7A4 578 aa20.61■□□□□ 0.89
LSM4-202ENST00000593564 WDFY1Q8IWB7 410 aa20.61■□□□□ 0.89
LSM4-202ENST00000593564 MRPL37Q9BZE1 423 aaKnown RBP20.61■□□□□ 0.89
LSM4-202ENST00000593564 ULBP2Q9BZM5 246 aa20.61■□□□□ 0.89
LSM4-202ENST00000593564 TPK1Q9H3S4 243 aa20.61■□□□□ 0.89
LSM4-202ENST00000593564 IKZF5Q9H5V7 419 aa20.61■□□□□ 0.89
LSM4-202ENST00000593564 DENND2DQ9H6A0 471 aaPredicted RBP20.61■□□□□ 0.89
LSM4-202ENST00000593564 CCDC167Q9P0B6 97 aa20.61■□□□□ 0.89
LSM4-202ENST00000593564 TMEFF2Q9UIK5 374 aaPredicted RBP20.61■□□□□ 0.89
LSM4-202ENST00000593564 SLC13A4Q9UKG4 626 aa20.61■□□□□ 0.89
LSM4-202ENST00000593564 CORO2BQ9UQ03 480 aa20.61■□□□□ 0.89
LSM4-202ENST00000593564 ZNF726A6NNF4 738 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 M0R233 179 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 PLPP3O14495 311 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 ZNF500O60304 480 aaPredicted RBP20.6■□□□□ 0.89
LSM4-202ENST00000593564 SERPINB7O75635 380 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 B4GALT1P15291 398 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 IDH3AP50213 366 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 AQP5P55064 265 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 CDH12P55289 794 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 PIGFQ07326 219 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 CAMK2DQ13557 499 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 TRIP10Q15642 601 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 TRMT5Q32P41 509 aaKnown RBP20.6■□□□□ 0.89
LSM4-202ENST00000593564 RANBP3LQ86VV4 465 aaPredicted RBP20.6■□□□□ 0.89
LSM4-202ENST00000593564 ARMC8Q8IUR7 673 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 RFLNBQ8N5W9 214 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 OR6N1Q8NGY5 312 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 FOXB1Q99853 325 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 WFDC6Q9BQY6 131 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 CCDC28BQ9BUN5 200 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 ZNF224Q9NZL3 707 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 REV1Q9UBZ9 1251 aa20.6■□□□□ 0.89
LSM4-202ENST00000593564 LRRN3E7EW58 273 aa20.59■□□□□ 0.89
LSM4-202ENST00000593564 LYNX1G3V0Z9 82 aa20.59■□□□□ 0.89
LSM4-202ENST00000593564 LYNX1P0DP58 116 aa20.59■□□□□ 0.89
LSM4-202ENST00000593564 AQP1P29972 269 aa20.59■□□□□ 0.89
LSM4-202ENST00000593564 GLRXP35754 106 aa20.59■□□□□ 0.89
LSM4-202ENST00000593564 C10orf53Q8N6V4 93 aa20.59■□□□□ 0.89
LSM4-202ENST00000593564 HIPK4Q8NE63 616 aa20.59■□□□□ 0.89
LSM4-202ENST00000593564 MS4A5Q9H3V2 200 aa20.59■□□□□ 0.89
LSM4-202ENST00000593564 FBXL3Q9UKT7 428 aa20.59■□□□□ 0.89
LSM4-202ENST00000593564 EVPLLA8MZ36 301 aa20.58■□□□□ 0.89
LSM4-202ENST00000593564 RAB36O95755 333 aa20.58■□□□□ 0.89
LSM4-202ENST00000593564 MT-ATP6P00846 226 aa20.58■□□□□ 0.89
LSM4-202ENST00000593564 AHCYP23526 432 aa20.58■□□□□ 0.89
LSM4-202ENST00000593564 GIPRP48546 466 aa20.58■□□□□ 0.89
LSM4-202ENST00000593564 PTDSS1P48651 473 aaKnown RBP20.58■□□□□ 0.89
LSM4-202ENST00000593564 RPS23P62266 143 aaKnown RBP20.58■□□□□ 0.89
LSM4-202ENST00000593564 ELFN2Q5R3F8 820 aa20.58■□□□□ 0.89
LSM4-202ENST00000593564 EBF4Q9BQW3 602 aa20.58■□□□□ 0.89
LSM4-202ENST00000593564 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.58■□□□□ 0.89
LSM4-202ENST00000593564 HAX1O00165 279 aa20.57■□□□□ 0.88
LSM4-202ENST00000593564 FMO6PO60774 539 aa20.57■□□□□ 0.88
LSM4-202ENST00000593564 MFN2O95140 757 aa20.57■□□□□ 0.88
LSM4-202ENST00000593564 UBL3O95164 117 aa20.57■□□□□ 0.88
LSM4-202ENST00000593564 C8BP07358 591 aa20.57■□□□□ 0.88
LSM4-202ENST00000593564 SRP14P37108 136 aaKnown RBP20.57■□□□□ 0.88
LSM4-202ENST00000593564 CSNK1A1P48729 337 aa20.57■□□□□ 0.88
LSM4-202ENST00000593564 DVL1P1P54792 670 aaPredicted RBP20.57■□□□□ 0.88
LSM4-202ENST00000593564 RAB1AP62820 205 aa20.57■□□□□ 0.88
LSM4-202ENST00000593564 FXNQ16595 210 aa20.57■□□□□ 0.88
LSM4-202ENST00000593564 GKAP1Q5VSY0 366 aaPredicted RBP20.57■□□□□ 0.88
LSM4-202ENST00000593564 ZNF613Q6PF04 617 aa20.57■□□□□ 0.88
LSM4-202ENST00000593564 LINC00114Q6XXX2 140 aa20.57■□□□□ 0.88
LSM4-202ENST00000593564 OR5J2Q8NH18 312 aa20.57■□□□□ 0.88
LSM4-202ENST00000593564 CPPED1Q9BRF8 314 aaPredicted RBP20.57■□□□□ 0.88
LSM4-202ENST00000593564 ANGPT4Q9Y264 503 aa20.57■□□□□ 0.88
LSM4-202ENST00000593564 TCF21O43680 179 aa20.56■□□□□ 0.88
LSM4-202ENST00000593564 SERPINI2O75830 405 aa20.56■□□□□ 0.88
LSM4-202ENST00000593564 PCMT1P22061 227 aa20.56■□□□□ 0.88
LSM4-202ENST00000593564 ATP4BP51164 291 aa20.56■□□□□ 0.88
LSM4-202ENST00000593564 GALK2Q01415 458 aa20.56■□□□□ 0.88
LSM4-202ENST00000593564 CCNIQ14094 377 aa20.56■□□□□ 0.88
LSM4-202ENST00000593564 REP15Q6BDI9 236 aa20.56■□□□□ 0.88
LSM4-202ENST00000593564 DLEU7Q6UYE1 221 aa20.56■□□□□ 0.88
LSM4-202ENST00000593564 PIWIL3Q7Z3Z3 882 aaKnown RBP20.56■□□□□ 0.88
LSM4-202ENST00000593564 MCHR1Q99705 422 aa20.56■□□□□ 0.88
LSM4-202ENST00000593564 ARHGDIGQ99819 225 aa20.56■□□□□ 0.88
LSM4-202ENST00000593564 SYT3Q9BQG1 590 aa20.56■□□□□ 0.88
LSM4-202ENST00000593564 SLCO1B3Q9NPD5 702 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms