RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 SH2D1BO14796 132 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 LGI1O95970 557 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 GKN3PP0CG01 181 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 PRF1P14222 555 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 GPX3P22352 226 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 MPGP29372 298 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 ACTBP60709 375 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 LCN6P62502 163 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 ACTG1P63261 375 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 GALEQ14376 348 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 ETFDHQ16134 617 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 ACTBL2Q562R1 376 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 RIPPLY2Q5TAB7 128 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 EIF5AL1Q6IS14 154 aaKnown RBP5.73□□□□□ -1.49
SMAD4-212ENST00000591126 DCDC5Q6ZRR9 648 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 MEX3DQ86XN8 651 aaKnown RBP5.73□□□□□ -1.49
SMAD4-212ENST00000591126 TMEM130Q8N3G9 435 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 NKAIN3Q8N8D7 197 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 OR4K13Q8NH42 304 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 PYDC1Q8WXC3 89 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 EXTL1Q92935 676 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 TMIGD2Q96BF3 282 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 RRNAD1Q96FB5 475 aaKnown RBP5.73□□□□□ -1.49
SMAD4-212ENST00000591126 GPA33Q99795 319 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 WDR76Q9H967 626 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 SMCHD1A6NHR9 2005 aa5.73□□□□□ -1.49
SMAD4-212ENST00000591126 E9PLN8 166 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 KIAA0513O60268 411 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 SULT1C4O75897 302 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 WNT1P04628 370 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 UCHL1P09936 223 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF44P15621 663 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 FPR3P25089 353 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 ABCD3P28288 659 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 PGFP49763 221 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 F2RL1P55085 397 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 PYDC2Q56P42 97 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 ANKRD16Q6P6B7 361 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 NEIL3Q8TAT5 605 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 ABHD4Q8TB40 342 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 CNOT9Q92600 299 aaKnown RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 NMD3Q96D46 503 aaKnown RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 HRASLS5Q96KN8 279 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 LRRC3BQ96PB8 259 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 RASL10BQ96S79 203 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 VKORC1Q9BQB6 163 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 WDR12Q9GZL7 423 aaKnown RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 C1RLQ9NZP8 487 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 ACSL6Q9UKU0 697 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 GPR55Q9Y2T6 319 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 LIPGQ9Y5X9 500 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 KIAA1217Q5T5P2 1943 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 COL4A6Q14031 1691 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 TRBV2A0A0J9YWF9 115 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 TMEM269A0A1B0GVZ9 245 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF732B4DXR9 585 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 TAPBPO15533 448 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 NME2P1O60361 137 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 DXOO77932 396 aaKnown RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 CNOT4O95628 575 aaKnown RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 PPP1R3DO95685 299 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 FBXO45P0C2W1 286 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 NME2P22392 152 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 GABRR1P24046 479 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 TGM4P49221 684 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 IDH3GP51553 393 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 WDR4P57081 412 aaKnown RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 ELF3P78545 371 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 RAB40BQ12829 278 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 MDGA2Q7Z553 956 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 FJX1Q86VR8 437 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 LRRC56Q8IYG6 542 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 TCEANCQ8N8B7 351 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 OR5M9Q8NGP3 310 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF418Q8TF45 676 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 CHPT1Q8WUD6 406 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 NEU4Q8WWR8 484 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 H1FXQ92522 213 aaKnown RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 PIGCQ92535 297 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 SLC25A44Q96H78 314 aaPredicted RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 MACROD1Q9BQ69 325 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 TXNIPQ9H3M7 391 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 PLSCR2Q9NRY7 297 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 SLC22A11Q9NSA0 550 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 DDX28Q9NUL7 540 aaKnown RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 ABCD2Q9UBJ2 740 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 MRPS18CQ9Y3D5 142 aaKnown RBP5.72□□□□□ -1.49
SMAD4-212ENST00000591126 EP400Q96L91 3159 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 TMEM233B4DJY2 109 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 ICOSLGO75144 302 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 SLC22A5O76082 557 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 HTR3BO95264 441 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 PMS2P2O95744 297 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 ADH4P08319 380 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 OR2T7P0C7T2 308 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 ECI1P42126 302 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 MAGEA12P43365 314 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 PCYT1AP49585 367 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 PRKXP51817 358 aa5.72□□□□□ -1.49
SMAD4-212ENST00000591126 ZNF133P52736 654 aaPredicted RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms