RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ZNF418Q8TF45 676 aaPredicted RBP12.02□□□□□ -0.49
VMP1-209ENST00000588915 MAL2Q969L2 176 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 ZMYND19Q96E35 227 aaPredicted RBP12.02□□□□□ -0.49
VMP1-209ENST00000588915 MS4A3Q96HJ5 214 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 PAIP2Q9BPZ3 127 aaKnown RBP12.02□□□□□ -0.49
VMP1-209ENST00000588915 ZNF416Q9BWM5 594 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 ASPNQ9BXN1 380 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 PAIP1Q9H074 479 aaKnown RBP12.02□□□□□ -0.49
VMP1-209ENST00000588915 METTL17Q9H7H0 456 aaPredicted RBP12.02□□□□□ -0.49
VMP1-209ENST00000588915 GMEB1Q9Y692 573 aa12.02□□□□□ -0.49
VMP1-209ENST00000588915 TRAV20A0A0B4J274 112 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 SEC14L2O76054 403 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 HPRP00739 348 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 HPXP02790 462 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 NUDT7P0C024 238 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 ARAFP10398 606 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 SAGP10523 405 aaPredicted RBP12.01□□□□□ -0.49
VMP1-209ENST00000588915 HTR2AP28223 471 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 GIPRP48546 466 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 PTDSS1P48651 473 aaKnown RBP12.01□□□□□ -0.49
VMP1-209ENST00000588915 MRPL19P49406 292 aaKnown RBP12.01□□□□□ -0.49
VMP1-209ENST00000588915 SLC18A1P54219 525 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 PIGFQ07326 219 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 PUDPQ08623 228 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 GKAP1Q5VSY0 366 aaPredicted RBP12.01□□□□□ -0.49
VMP1-209ENST00000588915 OR51F2Q8NH61 342 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 FOXB1Q99853 325 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 TMEM43Q9BTV4 400 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 EMC6Q9BV81 110 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 PLA2G12AQ9BZM1 189 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 ULBP2Q9BZM5 246 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 TMEM27Q9HBJ8 222 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 ZNF224Q9NZL3 707 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 TESQ9UGI8 421 aaKnown RBP12.01□□□□□ -0.49
VMP1-209ENST00000588915 SLC7A8Q9UHI5 535 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 GPR160Q9UJ42 338 aa12.01□□□□□ -0.49
VMP1-209ENST00000588915 A0A0B4J2E0 115 aa12□□□□□ -0.49
VMP1-209ENST00000588915 A0A1B0GX12 115 aa12□□□□□ -0.49
VMP1-209ENST00000588915 SLC22A23A1A5C7 686 aa12□□□□□ -0.49
VMP1-209ENST00000588915 PRORSD1PA6NEY8 169 aa12□□□□□ -0.49
VMP1-209ENST00000588915 MT-ATP6P00846 226 aa12□□□□□ -0.49
VMP1-209ENST00000588915 BGLAPP02818 100 aa12□□□□□ -0.49
VMP1-209ENST00000588915 SERPINA5P05154 406 aa12□□□□□ -0.49
VMP1-209ENST00000588915 GAAP10253 952 aa12□□□□□ -0.49
VMP1-209ENST00000588915 KITP10721 976 aa12□□□□□ -0.49
VMP1-209ENST00000588915 HLA-DOBP13765 273 aa12□□□□□ -0.49
VMP1-209ENST00000588915 HOXB9P17482 250 aaPredicted RBP12□□□□□ -0.49
VMP1-209ENST00000588915 PPIBP23284 216 aaKnown RBP12□□□□□ -0.49
VMP1-209ENST00000588915 ALDH3B1P43353 468 aa12□□□□□ -0.49
VMP1-209ENST00000588915 WDR4P57081 412 aaKnown RBP12□□□□□ -0.49
VMP1-209ENST00000588915 SELENOVP59797 346 aa12□□□□□ -0.49
VMP1-209ENST00000588915 NCALDP61601 193 aa12□□□□□ -0.49
VMP1-209ENST00000588915 LMO4P61968 165 aa12□□□□□ -0.49
VMP1-209ENST00000588915 MYBPC1Q00872 1141 aa12□□□□□ -0.49
VMP1-209ENST00000588915 PMS2P3Q13401 168 aa12□□□□□ -0.49
VMP1-209ENST00000588915 CAMK2DQ13557 499 aa12□□□□□ -0.49
VMP1-209ENST00000588915 CEP85LQ5SZL2 805 aa12□□□□□ -0.49
VMP1-209ENST00000588915 LRIF1Q5T3J3 769 aa12□□□□□ -0.49
VMP1-209ENST00000588915 SWT1Q5T5J6 900 aaKnown RBP12□□□□□ -0.49
VMP1-209ENST00000588915 CARD17Q5XLA6 110 aa12□□□□□ -0.49
VMP1-209ENST00000588915 REEP3Q6NUK4 255 aa12□□□□□ -0.49
VMP1-209ENST00000588915 DPPA2Q7Z7J5 298 aa12□□□□□ -0.49
VMP1-209ENST00000588915 MIER2Q8N344 545 aa12□□□□□ -0.49
VMP1-209ENST00000588915 GOLGA6L1Q8N7Z2 621 aa12□□□□□ -0.49
VMP1-209ENST00000588915 OR6N1Q8NGY5 312 aa12□□□□□ -0.49
VMP1-209ENST00000588915 FAM216AQ8WUB2 273 aa12□□□□□ -0.49
VMP1-209ENST00000588915 TXNDC15Q96J42 360 aa12□□□□□ -0.49
VMP1-209ENST00000588915 JMJD8Q96S16 334 aa12□□□□□ -0.49
VMP1-209ENST00000588915 SYT3Q9BQG1 590 aa12□□□□□ -0.49
VMP1-209ENST00000588915 RSPO3Q9BXY4 272 aaPredicted RBP12□□□□□ -0.49
VMP1-209ENST00000588915 CENPHQ9H3R5 247 aa12□□□□□ -0.49
VMP1-209ENST00000588915 ZNF275Q9NSD4 429 aaPredicted RBP12□□□□□ -0.49
VMP1-209ENST00000588915 MED29Q9NX70 200 aa12□□□□□ -0.49
VMP1-209ENST00000588915 TMEM89A2RUT3 159 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 FAM157AC9JC47 383 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 TRIM77I1YAP6 450 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 PLPP3O14495 311 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 SPRY1O43609 319 aaPredicted RBP11.99□□□□□ -0.49
VMP1-209ENST00000588915 TCN1P20061 433 aaPredicted RBP11.99□□□□□ -0.49
VMP1-209ENST00000588915 CBLP22681 906 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 SEC24CP53992 1094 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 AQP5P55064 265 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 CDK6Q00534 326 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 OR1Q1Q15612 314 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 SHQ1Q6PI26 577 aaKnown RBP11.99□□□□□ -0.49
VMP1-209ENST00000588915 LRP11Q86VZ4 500 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 CARM1Q86X55 608 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 OR9I1Q8NGQ6 314 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 SGMS2Q8NHU3 365 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 YIPF5Q969M3 257 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 LRRC37BQ96QE4 947 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 ZNF607Q96SK3 696 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 C1orf198Q9H425 327 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 TMEM38AQ9H6F2 299 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 NKIRAS2Q9NYR9 191 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 TREM2Q9NZC2 230 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 PCDHB10Q9UN67 800 aa11.99□□□□□ -0.49
VMP1-209ENST00000588915 TMEM120BA0PK00 339 aa11.98□□□□□ -0.49
VMP1-209ENST00000588915 PPIHO43447 177 aaKnown RBP11.98□□□□□ -0.49
VMP1-209ENST00000588915 MGRN1O60291 552 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms