RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 CCDC36Q8IYA8 594 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 ZCCHC24Q8N2G6 241 aaKnown RBP16.24■□□□□ 0.19
TRIM47-205ENST00000587774 DPP10Q8N608 796 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 ARIH2OSQ8N7S6 290 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 OR6T1Q8NGN1 323 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 MS4A3Q96HJ5 214 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 LRR1Q96L50 414 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 MAGEB18Q96M61 343 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 CGREF1Q99674 301 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 ULBP2Q9BZM5 246 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 BPESC1Q9GZL8 116 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 B3GAT2Q9NPZ5 323 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 B3GNT2Q9NY97 397 aa16.24■□□□□ 0.19
TRIM47-205ENST00000587774 CPSF4LA6NMK7 179 aaKnown RBP16.23■□□□□ 0.19
TRIM47-205ENST00000587774 THY1P04216 161 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 CD79AP11912 226 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 AHCYP23526 432 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 IGFBP5P24593 272 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 DAG1Q14118 895 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 GSG1Q2KHT4 349 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 ENTPD8Q5MY95 495 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 LINC00114Q6XXX2 140 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 ZNF627Q7L945 461 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 PXKQ7Z7A4 578 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 TSPYL5Q86VY4 417 aaPredicted RBP16.23■□□□□ 0.19
TRIM47-205ENST00000587774 PHC2Q8IXK0 858 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 CDK20Q8IZL9 346 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 OR4D11Q8NGI4 311 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 OR5J2Q8NH18 312 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 VANGL1Q8TAA9 524 aaPredicted RBP16.23■□□□□ 0.19
TRIM47-205ENST00000587774 CKAP2Q8WWK9 683 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 MSI2Q96DH6 328 aaKnown RBP16.23■□□□□ 0.19
TRIM47-205ENST00000587774 DOK1Q99704 481 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 REPIN1Q9BWE0 567 aaKnown RBP16.23■□□□□ 0.19
TRIM47-205ENST00000587774 BEX2Q9BXY8 128 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 RAB1BQ9H0U4 201 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 CHODLQ9H9P2 273 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 NPHS2Q9NP85 383 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 ZNF224Q9NZL3 707 aa16.23■□□□□ 0.19
TRIM47-205ENST00000587774 TMEM129A0AVI4 362 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 ZNF726A6NNF4 738 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 HMGB1P1B2RPK0 211 aaPredicted RBP16.22■□□□□ 0.19
TRIM47-205ENST00000587774 C11orf98E9PRG8 122 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 M0QX08 132 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 LMX1BO60663 402 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 MT-ATP6P00846 226 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 C8BP07358 591 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 IGFBP1P08833 259 aaPredicted RBP16.22■□□□□ 0.19
TRIM47-205ENST00000587774 ADORA3P0DMS8 318 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 APEHP13798 732 aaKnown RBP16.22■□□□□ 0.19
TRIM47-205ENST00000587774 ZNF14P17017 642 aaPredicted RBP16.22■□□□□ 0.19
TRIM47-205ENST00000587774 PIGFQ07326 219 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 NFYCQ13952 458 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 FAM166AQ6J272 317 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 RBM45Q8IUH3 476 aaKnown RBP16.22■□□□□ 0.19
TRIM47-205ENST00000587774 IL17RDQ8NFM7 739 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 OR6N1Q8NGY5 312 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 ADAMTS16Q8TE57 1224 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 ZNF75AQ96N20 296 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 FOXB1Q99853 325 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 SHARPINQ9H0F6 387 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 KAT8Q9H7Z6 458 aaKnown RBP16.22■□□□□ 0.19
TRIM47-205ENST00000587774 DYNLRB1Q9NP97 96 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 LPAR3Q9UBY5 353 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 FBXO9Q9UK97 447 aaPredicted RBP16.22■□□□□ 0.19
TRIM47-205ENST00000587774 TRIM33Q9UPN9 1127 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 ANK2Q01484 3957 aa16.22■□□□□ 0.19
TRIM47-205ENST00000587774 SH3PXD2BA1X283 911 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 PHF1O43189 567 aaPredicted RBP16.21■□□□□ 0.19
TRIM47-205ENST00000587774 LYPD3O95274 346 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 DAOP14920 347 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 IFNGR1P15260 489 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 CD247P20963 164 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 PCGF2P35227 344 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 CSNK1A1P48729 337 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 BIDP55957 195 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 ZNF74Q16587 644 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 MSMPQ1L6U9 139 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 IQCCQ4KMZ1 466 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 IL17RELQ6ZVW7 336 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 TAMM41Q96BW9 452 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 KCNS2Q9ULS6 477 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 POFUT2Q9Y2G5 429 aa16.21■□□□□ 0.19
TRIM47-205ENST00000587774 LOC100289279A0A1B0GTE1 492 aa16.2■□□□□ 0.18
TRIM47-205ENST00000587774 VSTM5A8MXK1 200 aa16.2■□□□□ 0.18
TRIM47-205ENST00000587774 KPNA4O00629 521 aaPredicted RBP16.2■□□□□ 0.18
TRIM47-205ENST00000587774 EDF1O60869 148 aaKnown RBP16.2■□□□□ 0.18
TRIM47-205ENST00000587774 STAMBPO95630 424 aa16.2■□□□□ 0.18
TRIM47-205ENST00000587774 ERCC1P07992 297 aaPredicted RBP16.2■□□□□ 0.18
TRIM47-205ENST00000587774 ZNF23P17027 643 aa16.2■□□□□ 0.18
TRIM47-205ENST00000587774 NR4A1P22736 598 aa16.2■□□□□ 0.18
TRIM47-205ENST00000587774 PTDSS1P48651 473 aaKnown RBP16.2■□□□□ 0.18
TRIM47-205ENST00000587774 CRYBA2P53672 197 aa16.2■□□□□ 0.18
TRIM47-205ENST00000587774 PATL1Q86TB9 770 aaKnown RBP16.2■□□□□ 0.18
TRIM47-205ENST00000587774 SNX32Q86XE0 403 aa16.2■□□□□ 0.18
TRIM47-205ENST00000587774 SLC30A8Q8IWU4 369 aa16.2■□□□□ 0.18
TRIM47-205ENST00000587774 OR10A6Q8NH74 314 aa16.2■□□□□ 0.18
TRIM47-205ENST00000587774 NEU4Q8WWR8 484 aaPredicted RBP16.2■□□□□ 0.18
TRIM47-205ENST00000587774 SOX7Q9BT81 388 aa16.2■□□□□ 0.18
TRIM47-205ENST00000587774 SLC7A7Q9UM01 511 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms