RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 LRRC74AQ0VAA2 488 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 TUSC1Q2TAM9 212 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 ALKBH6Q3KRA9 238 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 GLIPR1L2Q4G1C9 344 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 PDCD4Q53EL6 469 aaKnown RBP10.15□□□□□ -0.78
BRCA1-225ENST00000586385 AWAT1Q58HT5 328 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 SHQ1Q6PI26 577 aaKnown RBP10.15□□□□□ -0.78
BRCA1-225ENST00000586385 WDR88Q6ZMY6 472 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 OR9I1Q8NGQ6 314 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 GTF3AQ92664 365 aaKnown RBP10.15□□□□□ -0.78
BRCA1-225ENST00000586385 SLC38A4Q969I6 547 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 LRR1Q96L50 414 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 SLC6A7Q99884 636 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 ZNF232Q9UNY5 417 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 IFT52Q9Y366 437 aa10.15□□□□□ -0.78
BRCA1-225ENST00000586385 TRIM77I1YAP6 450 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 PLPP2O43688 288 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 CDC14BO60729 498 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 FSHBP01225 129 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 IL6P05231 212 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 ADRA2CP18825 462 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 ERVS71-1P61550 626 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 RAB1AP62820 205 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 MYBPC1Q00872 1141 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 STX3Q13277 289 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 CAMK2DQ13557 499 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 RGNQ15493 299 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 TRMT5Q32P41 509 aaKnown RBP10.14□□□□□ -0.79
BRCA1-225ENST00000586385 TNFAIP8L3Q5GJ75 292 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 AVPI1Q5T686 147 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 MAVSQ7Z434 540 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 C1QL2Q7Z5L3 287 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 UEVLDQ8IX04 471 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 SKA3Q8IX90 412 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 MSRB3Q8IXL7 192 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 GLB1L3Q8NCI6 653 aaPredicted RBP10.14□□□□□ -0.79
BRCA1-225ENST00000586385 MAELQ96JY0 434 aaKnown RBP10.14□□□□□ -0.79
BRCA1-225ENST00000586385 FOXB1Q99853 325 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 RBM4Q9BWF3 364 aaKnown RBP10.14□□□□□ -0.79
BRCA1-225ENST00000586385 PAIP1Q9H074 479 aaKnown RBP10.14□□□□□ -0.79
BRCA1-225ENST00000586385 ZNF385DQ9H6B1 395 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 ZNF665Q9H7R5 613 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 SSU72Q9NP77 194 aaKnown RBP10.14□□□□□ -0.79
BRCA1-225ENST00000586385 A4GALTQ9NPC4 353 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 OPN4Q9UHM6 478 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 DUSP13Q9UII6 198 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 POFUT2Q9Y2G5 429 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 CACNG2Q9Y698 323 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 PKD1L1Q8TDX9 2849 aa10.14□□□□□ -0.79
BRCA1-225ENST00000586385 IGLV3-9A0A075B6K5 115 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 C17orf100A8MU93 164 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 PLPP3O14495 311 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 TM9SF1O15321 606 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 TMPRSS2O15393 492 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 AKAP8O43823 692 aaKnown RBP10.13□□□□□ -0.79
BRCA1-225ENST00000586385 SNNO75324 88 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-225ENST00000586385 SLC22A3O75751 556 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 MPZL1O95297 269 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 SERPINA5P05154 406 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 CCL2P13500 99 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 PRKAR1BP31321 381 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 CCL8P80075 99 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 MVKQ03426 396 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 HNRNPA0Q13151 305 aaKnown RBP10.13□□□□□ -0.79
BRCA1-225ENST00000586385 ALG10BQ5I7T1 473 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 TMEM255AQ5JRV8 349 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 PRR31Q5SQ13 230 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 GKAP1Q5VSY0 366 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-225ENST00000586385 LRFN4Q6PJG9 635 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 C5orf46Q6UWT4 87 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 NET1Q7Z628 596 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-225ENST00000586385 SCAIQ8N9R8 606 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 OR6S1Q8NH40 331 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 RNF217Q8TC41 542 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 GTF2H4Q92759 462 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 TMEM54Q969K7 222 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 ZBTB9Q96C00 473 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 ZBTB18Q99592 522 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 ZNF416Q9BWM5 594 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 ULBP2Q9BZM5 246 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 DENND2DQ9H6A0 471 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-225ENST00000586385 HINT3Q9NQE9 182 aaKnown RBP10.13□□□□□ -0.79
BRCA1-225ENST00000586385 SDR39U1Q9NRG7 319 aaPredicted RBP10.13□□□□□ -0.79
BRCA1-225ENST00000586385 MRPL39Q9NYK5 338 aaKnown RBP10.13□□□□□ -0.79
BRCA1-225ENST00000586385 SLC25A37Q9NYZ2 338 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 TAAR3PQ9P1P4 343 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 NOX1Q9Y5S8 564 aa10.13□□□□□ -0.79
BRCA1-225ENST00000586385 TRRAPQ9Y4A5 3859 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 A0A0B4J2E0 115 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 A0A1B0GX12 115 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 A0A1W2PPW3 197 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 HDAC3O15379 428 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 RAB36O95755 333 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 IGHV2-5P01817 119 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 FAM157BP0CG42 384 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 IDO1P14902 403 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 ETS2P15036 469 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 ZNF250P15622 560 aa10.12□□□□□ -0.79
BRCA1-225ENST00000586385 WDR4P57081 412 aaKnown RBP10.12□□□□□ -0.79
BRCA1-225ENST00000586385 RPS23P62266 143 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms