RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 PGLYRP3Q96LB9 341 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 ADAD1Q96M93 576 aaKnown RBP10.18□□□□□ -0.78
LIG3-204ENST00000585740 ATF6BQ99941 703 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 KLHDC3Q9BQ90 382 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 TTYH2Q9BSA4 534 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 MFRPQ9BY79 579 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 ULBP3Q9BZM4 244 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 SRRQ9GZT4 340 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 MIXL1Q9H2W2 232 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 MARCH7Q9H992 704 aa10.18□□□□□ -0.78
LIG3-204ENST00000585740 VSX1Q9NZR4 365 aaPredicted RBP10.18□□□□□ -0.78
LIG3-204ENST00000585740 PTRH2Q9Y3E5 179 aaKnown RBP10.18□□□□□ -0.78
LIG3-204ENST00000585740 IGHV1-45A0A0A0MS14 117 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 TRBV2A0A0J9YWF9 115 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 A0A1W2PQ72 361 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 CENPBD1B2RD01 187 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 E9PI62 339 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 C11orf98E9PRG8 122 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 LRRTM2O43300 516 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 GDF9O60383 454 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 ZNF354AO60765 605 aaPredicted RBP10.17□□□□□ -0.78
LIG3-204ENST00000585740 FZD7O75084 574 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 OR2J2O76002 312 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 ZNF432O94892 652 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 KRT8P05787 483 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 ZNF28P17035 718 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 FOLR3P41439 243 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 E2F1Q01094 437 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 EGR3Q06889 387 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 BTBD16Q32M84 506 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 GLYR1Q49A26 553 aaPredicted RBP10.17□□□□□ -0.78
LIG3-204ENST00000585740 ACSM3Q53FZ2 586 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 DCAF12Q5T6F0 453 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 DNM1P34Q6PK57 102 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 ZNF517Q6ZMY9 492 aaPredicted RBP10.17□□□□□ -0.78
LIG3-204ENST00000585740 C16orf47Q6ZP98 133 aaPredicted RBP10.17□□□□□ -0.78
LIG3-204ENST00000585740 CDC20BQ86Y33 519 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 SNX29P2Q8IUI4 249 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 TIGD4Q8IY51 512 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 OR8H2Q8N162 312 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 ADPRHL1Q8NDY3 354 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 FAM83FQ8NEG4 500 aaPredicted RBP10.17□□□□□ -0.78
LIG3-204ENST00000585740 ZNF519Q8TB69 540 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 ASB17Q8WXJ9 295 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 THRSPQ92748 146 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 GHSRQ92847 366 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 RASL10BQ96S79 203 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 INTS14Q96SY0 518 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 ARRDC1-AS1Q9H2J1 176 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 WDR76Q9H967 626 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 SRA1Q9HD15 236 aaKnown RBP10.17□□□□□ -0.78
LIG3-204ENST00000585740 MED11Q9P086 117 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 COPS3Q9UNS2 423 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 B3GALT1Q9Y5Z6 326 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 V9GYH0 126 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 ASPMQ8IZT6 3477 aa10.17□□□□□ -0.78
LIG3-204ENST00000585740 COL27A1Q8IZC6 1860 aaPredicted RBP10.17□□□□□ -0.78
LIG3-204ENST00000585740 A0A087WZY1 265 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 PRSS37A4D1T9 235 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 ZNF879B4DU55 563 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 FTCDNL1E5RQL4 147 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 PDCD5O14737 125 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 TMCC2O75069 709 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 LRP3O75074 770 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 DKK1O94907 266 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 RAB40ALP0C0E4 278 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 CCL4P13236 92 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 AHCYP23526 432 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 ADH6P28332 368 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 SHC1P29353 583 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 CRABP1P29762 137 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 PTGDSP41222 190 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 EIF1P41567 113 aaKnown RBP10.16□□□□□ -0.78
LIG3-204ENST00000585740 DAP3P51398 398 aaKnown RBP10.16□□□□□ -0.78
LIG3-204ENST00000585740 PSMD7P51665 324 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 HCCSP53701 268 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 SCN1BQ07699 218 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 PUDPQ08623 228 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 FOXF1Q12946 379 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 RIN1Q13671 783 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 ACKR1Q16570 336 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 YIF1BQ5BJH7 314 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 ZMAT1Q5H9K5 638 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 ZNF684Q5T5D7 378 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 C1QL3Q5VWW1 255 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 ZNF544Q6NX49 715 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 UNQ9370/PRO34162Q6UXP9 181 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 H1FNTQ75WM6 255 aaPredicted RBP10.16□□□□□ -0.78
LIG3-204ENST00000585740 GHDCQ8N2G8 530 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 ZNF511Q8NB15 262 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 OR4K17Q8NGC6 315 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 ZNF417Q8TAU3 575 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 SLC25A43Q8WUT9 341 aaPredicted RBP10.16□□□□□ -0.78
LIG3-204ENST00000585740 ZNRF4Q8WWF5 429 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 IMMP1LQ96LU5 166 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 DCLRE1CQ96SD1 692 aaKnown RBP10.16□□□□□ -0.78
LIG3-204ENST00000585740 ZNF587Q96SQ5 575 aaPredicted RBP10.16□□□□□ -0.78
LIG3-204ENST00000585740 SDHCQ99643 169 aaPredicted RBP10.16□□□□□ -0.78
LIG3-204ENST00000585740 RNF32Q9H0A6 362 aa10.16□□□□□ -0.78
LIG3-204ENST00000585740 PTGES2Q9H7Z7 377 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms