RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	TSTD1	Q8NFU3	115 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	OR13H1	Q8NG92	308 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	OR4D9	Q8NGE8	314 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	OR51A7	Q8NH64	312 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ZFAND1	Q8TCF1	268 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	LCN9	Q8WX39	176 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MAFIP	Q8WZ33	124 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	OR2M4	Q96R27	311 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SLC38A1	Q9H2H9	487 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	OR51M1	Q9H341	326 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PRO3102	Q9H379	93 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ING3	Q9NXR8	418 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MIOX	Q9UGB7	285 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SLC17A4	Q9Y2C5	497 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SPAG17	Q6Q759	2223 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063		J3QLW9	94 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	TNFRSF6B	O95407	300 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	TGFA	P01135	160 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ZNF19	P17023	458 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ERVK-25	P63136	954 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SIM1	P81133	766 aa	Predicted RBP	10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	TRIM61	Q5EBN2	209 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	RAB42	Q8N4Z0	105 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ADAMTS15	Q8TE58	950 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	CDS1	Q92903	461 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	FGF11	Q92914	225 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ELF4	Q99607	663 aa	Predicted RBP	10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	THAP7	Q9BT49	309 aa	Predicted RBP	10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	C1QTNF6	Q9BXI9	259 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	EIF3K	Q9UBQ5	218 aa	Known RBP	10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MGAT4A	Q9UM21	535 aa		10.62	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SHISA7	A6NL88	538 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	CRYGC	P07315	174 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PTHLH	P12272	177 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ABCD3	P28288	659 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	EIF1AX	P47813	144 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	EFNB1	P98172	346 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	FZD5	Q13467	585 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MOGAT2	Q3SYC2	334 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PRSS41	Q7RTY9	318 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MAML2	Q8IZL2	1156 aa	Predicted RBP	10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	FAM181A	Q8N9Y4	354 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	NUDT10	Q8NFP7	164 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	OR11H4	Q8NGC9	324 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	C22orf15	Q8WYQ4	148 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MR1	Q95460	341 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PFDN5	Q99471	154 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	CDX2	Q99626	313 aa	Predicted RBP	10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	HINT2	Q9BX68	163 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ESRP2	Q9H6T0	727 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	USP36	Q9P275	1121 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	CBLC	Q9ULV8	474 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	LIPT1	Q9Y234	373 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	TRAV27	A0A087WT01	109 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	TMEM129	A0AVI4	362 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SURF4	O15260	269 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ARPC5	O15511	151 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	HLA-DPB1	P04440	258 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	CELA2B	P08218	269 aa	Predicted RBP	10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SRF	P11831	508 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ERP29	P30040	261 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	RPE65	Q16518	533 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	HYAL4	Q2M3T9	481 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	TMEM65	Q6PI78	240 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	LRRC69	Q6ZNQ3	347 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	GDF7	Q7Z4P5	450 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ARIH2OS	Q8N7S6	290 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	OR7G2	Q8NG99	324 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PIGX	Q8TBF5	258 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	GRHL3	Q8TE85	626 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	DNAJA3	Q96EY1	480 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	WDR92	Q96MX6	357 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SLC5A7	Q9GZV3	580 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	NIT2	Q9NQR4	276 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SLC5A6	Q9Y289	635 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	KCNK7	Q9Y2U2	307 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SEC16A	O15027	2179 aa		10.61	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	DUXA	A6NLW8	204 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ITGB1BP1	O14713	200 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	P2RX6	O15547	441 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ORC5	O43913	435 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MT-ND4	P03905	459 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ZNF806	P0C7X5	589 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SNRPB	P14678	240 aa	Known RBP	10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	NQO2	P16083	231 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	PAICS	P22234	425 aa	Known RBP	10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	GIF	P27352	417 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	AKT2	P31751	481 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	KHK	P50053	298 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	OR12D2	P58182	307 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	FGFBP1	Q14512	234 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ZIC1	Q15915	447 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	GXYLT1	Q4G148	440 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	MOGAT3	Q86VF5	341 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ARMC10	Q8N2F6	343 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	LRRC17	Q8N6Y2	441 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ATOH1	Q92858	354 aa	Predicted RBP	10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	SLC35A4	Q96G79	324 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ZNF559	Q9BR84	538 aa		10.6	□□□□□ -0.71
CDK5RAP3-231	ENST00000584063	ALG8	Q9BVK2	526 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms