RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 QARSP47897 775 aaKnown RBP2.07□□□□□ -2.08
COPS3-217ENST00000583160 SLC11A1P49279 550 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 CHRNB3Q05901 458 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 HTR4Q13639 388 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 LAGE3Q14657 143 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 DEFB116Q30KQ4 102 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 TIGITQ495A1 244 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 KPRPQ5T749 579 aaPredicted RBP2.07□□□□□ -2.08
COPS3-217ENST00000583160 ETFRF1Q6IPR1 90 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 SLC8B1Q6J4K2 584 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 CD300LGQ6UXG3 332 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 ALKAL1Q6UXT8 129 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 RFLNAQ6ZTI6 216 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 RUFY3Q7L099 469 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 OTUD6AQ7L8S5 288 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 ASCL5Q7RTU5 278 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 BLIDQ8IZY5 108 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 LINC01561Q8N1V8 128 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 NKAPP1Q8N9T2 125 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 PAQR8Q8TEZ7 354 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 MSANTD3Q96H12 275 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 MTMR9Q96QG7 549 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 HDHD3Q9BSH5 251 aaPredicted RBP2.07□□□□□ -2.08
COPS3-217ENST00000583160 TEKT3Q9BXF9 490 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 NT5C3AQ9H0P0 336 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 XPNPEP1Q9NQW7 623 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 MRPL39Q9NYK5 338 aaKnown RBP2.07□□□□□ -2.08
COPS3-217ENST00000583160 TREM2Q9NZC2 230 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 KIAA1549LQ6ZVL6 1849 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 ANK1P16157 1881 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 TPRP12270 2363 aaKnown RBP2.07□□□□□ -2.08
COPS3-217ENST00000583160 PTPRDP23468 1912 aa2.07□□□□□ -2.08
COPS3-217ENST00000583160 CACNA1BQ00975 2339 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 OBSL1O75147 1896 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 MYO16Q9Y6X6 1858 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 PPIAL4EA0A075B759 164 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 PPIAL4CA0A0B4J2A2 164 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 ARL5CA6NH57 179 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 ARHGAP42A6NI28 874 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 PPIAL4DF5H284 164 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 PFKFB2O60825 505 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 TNFSF13O75888 250 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 GIPP09681 153 aaPredicted RBP2.06□□□□□ -2.08
COPS3-217ENST00000583160 PPIAL4FP0DN26 164 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 ARF4P18085 180 aaPredicted RBP2.06□□□□□ -2.08
COPS3-217ENST00000583160 GLRA2P23416 452 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 YWHABP31946 246 aaKnown RBP2.06□□□□□ -2.08
COPS3-217ENST00000583160 SP4Q02446 784 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 LAMTOR4Q0VGL1 99 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 PDIA5Q14554 519 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 ANGPT1Q15389 498 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 ADPRMQ3LIE5 342 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 TPGS2Q68CL5 300 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 TWF2Q6IBS0 349 aaKnown RBP2.06□□□□□ -2.08
COPS3-217ENST00000583160 FAM199XQ6PEV8 388 aaPredicted RBP2.06□□□□□ -2.08
COPS3-217ENST00000583160 BLOC1S2Q6QNY1 142 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 C6orf89Q6UWU4 347 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 CENPQQ7L2Z9 268 aaPredicted RBP2.06□□□□□ -2.08
COPS3-217ENST00000583160 MIER3Q7Z3K6 550 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 C6orf120Q7Z4R8 191 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 METTL13Q8N6R0 699 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 ZNF461Q8TAF7 563 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 DQX1Q8TE96 717 aaKnown RBP2.06□□□□□ -2.08
COPS3-217ENST00000583160 GIMAP1Q8WWP7 306 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 SELENOMQ8WWX9 145 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 CABS1Q96KC9 395 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 TSNARE1Q96NA8 513 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 KLHDC3Q9BQ90 382 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 ATG10Q9H0Y0 220 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 ING2Q9H160 280 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 ADAM28Q9UKQ2 775 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 AP4B1Q9Y6B7 739 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 ANAPC1Q9H1A4 1944 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 CLUHO75153 1309 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 PHLPP2Q6ZVD8 1323 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 PHF3Q92576 2039 aaKnown RBP2.06□□□□□ -2.08
COPS3-217ENST00000583160 NUP205Q92621 2012 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 PI4KAP42356 2102 aa2.06□□□□□ -2.08
COPS3-217ENST00000583160 CNOT1A5YKK6 2376 aaKnown RBP2.06□□□□□ -2.08
COPS3-217ENST00000583160 TSC2P49815 1807 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 TICRRQ7Z2Z1 1910 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 ZNF638Q14966 1978 aaKnown RBP2.05□□□□□ -2.08
COPS3-217ENST00000583160 FRYLO94915 3013 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 MYO18AQ92614 2054 aaKnown RBP2.05□□□□□ -2.08
COPS3-217ENST00000583160 ACACBO00763 2458 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 A0A0U1RQS6 177 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 SYCE3A1L190 88 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 DDX39AO00148 427 aaKnown RBP2.05□□□□□ -2.08
COPS3-217ENST00000583160 DUX1O43812 170 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 SLC37A4O43826 429 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 CTDNEP1O95476 244 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 TDP2O95551 362 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 OLFM2O95897 454 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 MRPL3P09001 348 aaKnown RBP2.05□□□□□ -2.08
COPS3-217ENST00000583160 KCNE1P15382 129 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 AHCYP23526 432 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 DPP4P27487 766 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 BDKRB1P46663 353 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 CRISP3P54108 245 aa2.05□□□□□ -2.08
COPS3-217ENST00000583160 CSTF1Q05048 431 aaKnown RBP2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms