RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 OSBPL11Q9BXB4 747 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 GABARAPL3Q9BY60 117 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 LRRN3Q9H3W5 708 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 RPP21Q9H633 154 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 UGT1A7Q9HAW7 530 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 UGT1A10Q9HAW8 530 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 UGT1A8Q9HAW9 530 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 LY9Q9HBG7 655 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 FARSBQ9NSD9 589 aaKnown RBP1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 TAS2R3Q9NYW6 316 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 POLDIP2Q9Y2S7 368 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 RFNGQ9Y644 331 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 OTOGLQ3ZCN5 2332 aa1.57□□□□□ -2.16
SMCHD1-206ENST00000581631 PCM1Q15154 2024 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 IGLV3-22A0A075B6J6 115 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 RGSL1A5PLK6 1076 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 CCDC182A6NF36 153 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 PRRG1O14668 218 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 RBFOX2O43251 390 aaKnown RBP eCLIP1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 IFNB1P01574 187 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 CHI3L1P36222 383 aaPredicted RBP1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 CYB561P49447 251 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 PPT1P50897 306 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 ERVK-25P63136 954 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 HTD2P86397 168 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 KLRB1Q12918 225 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 AQP6Q13520 282 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 GANABQ14697 944 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 SLC36A3Q495N2 470 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 ZNF684Q5T5D7 378 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 HES5Q5TA89 166 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 TTC23Q5W5X9 447 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 PIANPQ8IYJ0 282 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 ANKFN1Q8N957 763 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 OR10G4Q8NGN3 311 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 TRMT10AQ8TBZ6 339 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 SDR42E1Q8WUS8 393 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 GEMIN6Q8WXD5 167 aaKnown RBP1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 SGK3Q96BR1 496 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 CXorf40BQ96DE9 158 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 FOXC2Q99958 501 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 CHAC1Q9BUX1 264 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 PIPOXQ9P0Z9 390 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 RNF14Q9UBS8 474 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 PACSIN2Q9UNF0 486 aaPredicted RBP1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 KCNIP3Q9Y2W7 256 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 KIF3AQ9Y496 699 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 BRWD3Q6RI45 1802 aa1.56□□□□□ -2.16
SMCHD1-206ENST00000581631 IGKV1D-13A0A0B4J2D9 117 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 A0A1B0GVI7 797 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 METTL21EPA6NDL7 271 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 OR5B21A6NL26 309 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 H0YHG0 523 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 XPO1O14980 1071 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 RAMP3O60896 148 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 GAPDHP04406 335 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 LINC00869P0C866 280 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 HSMCR30P0CW71 290 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 SMIM10L1P0DMW3 83 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 IGKV1-13P0DP09 117 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 KRT13P13646 458 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 SUB1P53999 127 aaKnown RBP eCLIP1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 RPS21P63220 83 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 DPYSL2Q16555 572 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 UTS2BQ765I0 119 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 STRADAQ7RTN6 431 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 BIVMQ86UB2 503 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 CALHM3Q86XJ0 350 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 ECHDC2Q86YB7 292 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 ZDHHC21Q8IVQ6 265 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 ZNF683Q8IZ20 524 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 STPG2Q8N412 459 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 MREGQ8N565 214 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 FAM133AQ8N9E0 248 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 RGP1Q92546 391 aaPredicted RBP1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 SMIM10Q96HG1 83 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 TSSK3Q96PN8 268 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 MRPL47Q9HD33 250 aaKnown RBP1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 POLE3Q9NRF9 147 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 UFSP2Q9NUQ7 469 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 BFARQ9NZS9 450 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 CEMIPQ8WUJ3 1361 aa1.55□□□□□ -2.16
SMCHD1-206ENST00000581631 KIR2DS1A0A191URI9 304 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 KMOO15229 486 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 RRP8O43159 456 aaKnown RBP1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 TOM1O60784 492 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 UGT2B4P06133 528 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 CCR1P32246 355 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 RORAP35398 523 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 GPR6P46095 362 aaPredicted RBP1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 NPBWR2P48146 333 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 ESRRGP62508 458 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 CBX1P83916 185 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 SCRN3Q0VDG4 424 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 ERCC8Q13216 396 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 KIR2DS1Q14954 304 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 PDK4Q16654 411 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 RIPPLY2Q5TAB7 128 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 TMEM225Q6GV28 225 aa1.54□□□□□ -2.16
SMCHD1-206ENST00000581631 WDR86Q86TI4 376 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms