RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 SMU1Q2TAY7 513 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 HFEQ30201 348 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 ARMCX4Q5H9R4 360 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 LEG1Q6P5S2 330 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 ZNF627Q7L945 461 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 BCL6BQ8N143 479 aaPredicted RBP10.83□□□□□ -0.68
SS18-219ENST00000581570 CLIP4Q8N3C7 705 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 ZNF417Q8TAU3 575 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 SYNPRQ8TBG9 265 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 KTI12Q96EK9 354 aaPredicted RBP10.83□□□□□ -0.68
SS18-219ENST00000581570 LRR1Q96L50 414 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 ZNF48Q96MX3 618 aaPredicted RBP10.83□□□□□ -0.68
SS18-219ENST00000581570 ZNF587Q96SQ5 575 aaPredicted RBP10.83□□□□□ -0.68
SS18-219ENST00000581570 EMC6Q9BV81 110 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 SLCO1C1Q9NYB5 712 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 ZNF224Q9NZL3 707 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 CACNG2Q9Y698 323 aa10.83□□□□□ -0.68
SS18-219ENST00000581570 IGLV3-9A0A075B6K5 115 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 PPIAL4EA0A075B759 164 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 PPIAL4CA0A0B4J2A2 164 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 LOC102725191A0A1B0GVB3 256 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 CCDC154A6NI56 674 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 SMIM23A6NLE4 172 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 PPIAL4DF5H284 164 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 OR2T1O43869 369 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 SERPINA5P05154 406 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 FAM153BP0C7A2 387 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 PATE4P0C8F1 98 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 FAM157BP0CG42 384 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 PPIAL4FP0DN26 164 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 ZNF250P15622 560 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 GRPRP30550 384 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 ARRB2P32121 409 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 ATP4BP51164 291 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 SPANXN4Q5MJ08 99 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 H1FNTQ75WM6 255 aaPredicted RBP10.82□□□□□ -0.68
SS18-219ENST00000581570 SNX32Q86XE0 403 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 UEVLDQ8IX04 471 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 TRIML2Q8N7C3 387 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 GLB1L3Q8NCI6 653 aaPredicted RBP10.82□□□□□ -0.68
SS18-219ENST00000581570 ST7LQ8TDW4 575 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 TAAR8Q969N4 342 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 TESCQ96BS2 214 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 CCDC115Q96NT0 180 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 FOXB1Q99853 325 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 PKP2Q99959 881 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 TXLNGYQ9BZA5 131 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 ULBP2Q9BZM5 246 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 UBAP1Q9NZ09 502 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 LEF1Q9UJU2 399 aaPredicted RBP10.82□□□□□ -0.68
SS18-219ENST00000581570 ZNF443Q9Y2A4 671 aaPredicted RBP10.82□□□□□ -0.68
SS18-219ENST00000581570 AUP1Q9Y679 476 aa10.82□□□□□ -0.68
SS18-219ENST00000581570 ISPDA4D126 451 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 MS4A18H0YCH9 400 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 CLDN34H7C241 214 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 FZD7O75084 574 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 FOXH1O75593 365 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 SHBGP04278 402 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 LCKP06239 509 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 HLA-DOBP13765 273 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 CBLP22681 906 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 S100A3P33764 101 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 SERPINB5P36952 375 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 RBBP4Q09028 425 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 LARS2Q15031 903 aaKnown RBP10.81□□□□□ -0.68
SS18-219ENST00000581570 SLC9A3R2Q15599 337 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 MAPK11Q15759 364 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 MOGQ16653 247 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 TSTQ16762 297 aaKnown RBP10.81□□□□□ -0.68
SS18-219ENST00000581570 MS4A18Q3C1V0 323 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 KLF17Q5JT82 389 aaPredicted RBP10.81□□□□□ -0.68
SS18-219ENST00000581570 COX20Q5RI15 118 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 FAM69AQ5T7M9 428 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 RNF220Q5VTB9 566 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 ZNF621Q6ZSS3 439 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 NET1Q7Z628 596 aaPredicted RBP10.81□□□□□ -0.68
SS18-219ENST00000581570 SERPINA11Q86U17 422 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 ZNF584Q8IVC4 421 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 IFT20Q8IY31 132 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 LRRC34Q8IZ02 419 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 MNS1Q8NEH6 495 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 DEFB108BQ8NET1 73 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 OR6N1Q8NGY5 312 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 ZNF519Q8TB69 540 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 PNPT1Q8TCS8 783 aaKnown RBP10.81□□□□□ -0.68
SS18-219ENST00000581570 C11orf40Q8WZ69 217 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 CCL17Q92583 94 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 TMIGD2Q96BF3 282 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 ELMOD3Q96FG2 381 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 PPP1R36Q96LQ0 422 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 OR51B6Q9H340 312 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 AKTIPQ9H8T0 292 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 SAP30LQ9HAJ7 183 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 MMP26Q9NRE1 261 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 BTNL2Q9UIR0 455 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 ZNF232Q9UNY5 417 aa10.81□□□□□ -0.68
SS18-219ENST00000581570 ZNF726A6NNF4 738 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 KNG1P01042 644 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 MT-ND5P03915 603 aa10.8□□□□□ -0.68
SS18-219ENST00000581570 MAKP20794 623 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms