RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 IFNGR1P15260 489 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 NUDT1P36639 197 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 ARHGAP11BQ3KRB8 267 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 LINC00303Q3SY05 128 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 EEF1A1P5Q5VTE0 462 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 C3orf33Q6P1S2 294 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 Q6ZTK2 550 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 C17orf47Q8NEP4 570 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 HOXB13Q92826 284 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 ZDHHC12Q96GR4 267 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 SLC41A2Q96JW4 573 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 HRH3Q9Y5N1 445 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 TNFSF12O43508 249 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 MED6O75586 246 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 GLCEO94923 617 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 ZNF250P15622 560 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 SPI1P17947 270 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 CXCL3P19876 107 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 PPT1P50897 306 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 POU3F1Q03052 451 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 ELOCQ15369 112 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 TANGO2Q6ICL3 276 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 OR5D18Q8NGL1 313 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 OR6M1Q8NGM8 313 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 PTGES2Q9H7Z7 377 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 WDR76Q9H967 626 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 GPATCH2Q9NW75 528 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 COL11A1P12107 1806 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 P2RX6O15547 441 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 TIMP1P01033 207 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 CA3P07451 260 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 TM4SF4P48230 202 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 CAV2P51636 162 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 IRF3Q14653 427 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 MED25Q71SY5 747 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 ZFP82Q8N141 532 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 TEX19Q8NA77 164 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 CHAC2Q8WUX2 184 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 PATE1Q8WXA2 126 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 C3orf49Q96BT1 292 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 GIMAP5Q96F15 307 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 HHIPL1Q96JK4 782 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 ANKRD31Q8N7Z5 1873 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 HOXB3P14651 431 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 SLC26A5P58743 744 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 HSD11B2P80365 405 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 TMEM244Q5VVB8 128 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 STK35Q8TDR2 534 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 NRSN2Q9GZP1 204 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 ERVMER34-1Q9H9K5 563 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 RNF215Q9Y6U7 377 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 SPTBP11277 2137 aa12.49□□□□□ -0.41
TRAPPC8-207ENST00000580104 MIA3Q5JRA6 1907 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 GGT3PA6NGU5 568 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 AIPO00170 330 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 HSPA12AO43301 675 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 NME2P22392 152 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 SERTAD2Q14140 314 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 TMEM52BQ4KMG9 183 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 GPR139Q6DWJ6 353 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 TMEM88Q6PEY1 159 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 MCEMP1Q8IX19 187 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 OR5M1Q8NGP8 315 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 HAVCR2Q8TDQ0 301 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 SIPA1L1O43166 1804 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 TRAPPC6AO75865 159 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 BDKRB2P30411 391 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 ZP2Q05996 745 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 DUSP8Q13202 625 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 ZNF77Q15935 545 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 TMEM201Q5SNT2 666 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 PLPP6Q8IY26 295 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 OR5D14Q8NGL3 314 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 SMIM4Q8WVI0 70 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 C1QTNF6Q9BXI9 259 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 C6orf106Q9H6K1 298 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 ALKBH4Q9NXW9 302 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 C19orf53Q9UNZ5 99 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 CTGFP29279 349 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 HTRA3P83110 453 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 BDH1Q02338 343 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 OR10K2Q6IF99 312 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 RASGRP3Q8IV61 690 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 RADILQ96JH8 1075 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 OR10A5Q9H207 317 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 DUSP22Q9NRW4 184 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 COL11A2P13942 1736 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 OR2W5A6NFC9 320 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 SULT1B1O43704 296 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 CTNSO60931 367 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 CD3DP04234 171 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 SERPINA5P05154 406 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 ACSM4P0C7M7 580 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 ACHEP22303 614 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 PHF19Q5T6S3 580 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 CCL4L1Q8NHW4 92 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 ANGPTL6Q8NI99 470 aa12.48□□□□□ -0.41
TRAPPC8-207ENST00000580104 SLC2A12Q8TD20 617 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms