RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 ULK3Q6PHR2 472 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 C1QL2Q7Z5L3 287 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 CDK20Q8IZL9 346 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 RAB39BQ96DA2 213 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 TMEM19Q96HH6 336 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 SOX7Q9BT81 388 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 TMEM43Q9BTV4 400 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 SUCNR1Q9BXA5 334 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 SLC52A3Q9NQ40 469 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 SELENONQ9NZV5 590 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 CORO2BQ9UQ03 480 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 PLCE1Q9P212 2302 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 A0A096LPE4 126 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 A0A1W2PPZ6 126 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 LRP5LA4QPB2 252 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 NR5A2O00482 541 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 RGS16O15492 202 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 SPRY1O43609 319 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 ANP32DO95626 131 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 RAB36O95755 333 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 SELENOVP59797 346 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 HILS1P60008 231 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 CTAG1AP78358 180 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 IL1RL1Q01638 556 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 ELFN2Q5R3F8 820 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 PIWIL3Q7Z3Z3 882 aaKnown RBP9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 OR1J2Q8NGS2 313 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 PNPT1Q8TCS8 783 aaKnown RBP9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 SNX18Q96RF0 628 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 CRLF2Q9HC73 371 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 THAP1Q9NVV9 213 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 ATRQ13535 2644 aa9.67□□□□□ -0.86
SMARCE1-214ENST00000578112 A0A1W2PRQ8 180 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 FMO6PO60774 539 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 CRATP43155 626 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 MYBPC1Q00872 1141 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 LGALS3BPQ08380 585 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 BNIP2Q12982 314 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 RCN1Q15293 331 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 PXKQ7Z7A4 578 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 SERPINA11Q86U17 422 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 KRT73Q86Y46 540 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 CLIP4Q8N3C7 705 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 CLDND2Q8NHS1 167 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 SDR39U1Q9NRG7 319 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 SLCO1C1Q9NYB5 712 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 FAM53CQ9NYF3 392 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 CHST2Q9Y4C5 530 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 MALRD1Q5VYJ5 2156 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.66□□□□□ -0.861e-10■■■■□ 23.8
SMARCE1-214ENST00000578112 M0R082 166 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 PNPP00491 289 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 ETFAP13804 333 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 CPT2P23786 658 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 GRPRP30550 384 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 RPS5P46782 204 aaKnown RBP9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 ZP4Q12836 540 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 ATG16L1Q676U5 607 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 SHQ1Q6PI26 577 aaKnown RBP9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 NHLRC1Q6VVB1 395 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 SLC7A5P1Q8MH63 180 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 ZNF417Q8TAU3 575 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 DNAJA3Q96EY1 480 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 TEX37Q96LM6 180 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 ZNF587Q96SQ5 575 aaPredicted RBP9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 MRPL37Q9BZE1 423 aaKnown RBP9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 TCF7L2Q9NQB0 619 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 RLIMQ9NVW2 624 aa9.66□□□□□ -0.86
SMARCE1-214ENST00000578112 ZANQ9Y493 2812 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 A0A087WUJ7 227 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 ZNF726A6NNF4 738 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 C5orf58C9J3I9 102 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 H3BSA7 217 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 SNNO75324 88 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 B3GALNT1O75752 331 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 BGLAPP02818 100 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 CELA3BP08861 270 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 GAAP10253 952 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 IL2RGP31785 369 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 RGNQ15493 299 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 HDDC2Q7Z4H3 204 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 TMEM54Q969K7 222 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 SLC25A36Q96CQ1 311 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 KTI12Q96EK9 354 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 PLA2G12AQ9BZM1 189 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 C20orf27Q9GZN8 174 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 SEC61A2Q9H9S3 476 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 TMEM27Q9HBJ8 222 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 CGGBP1Q9UFW8 167 aaPredicted RBP9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 PCDHB10Q9UN67 800 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 MXRA5Q9NR99 2828 aa9.65□□□□□ -0.86
SMARCE1-214ENST00000578112 IGLV3-9A0A075B6K5 115 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 PPIAL4EA0A075B759 164 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 PPIAL4CA0A0B4J2A2 164 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 PPIAL4DF5H284 164 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 MS4A18H0YCH9 400 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 RP2O75695 350 aa9.65□□□□□ -0.87
SMARCE1-214ENST00000578112 VENTXO95231 258 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms