RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 GAREM1Q9H706 876 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 WDR54Q9H977 334 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 MCCC2Q9HCC0 563 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 HINT3Q9NQE9 182 aaKnown RBP4.39□□□□□ -1.71
IFT20-205ENST00000578009 SLC22A11Q9NSA0 550 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 C20orf141Q9NUB4 165 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 CRNNQ9UBG3 495 aaPredicted RBP4.39□□□□□ -1.71
IFT20-205ENST00000578009 DHCR7Q9UBM7 475 aaKnown RBP4.39□□□□□ -1.71
IFT20-205ENST00000578009 CLEC2DQ9UHP7 191 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 NXT1Q9UKK6 140 aaKnown RBP4.39□□□□□ -1.71
IFT20-205ENST00000578009 RARRES3Q9UL19 164 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 STUB1Q9UNE7 303 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 SSR3Q9UNL2 185 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 ZNF337Q9Y3M9 751 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 UGT2A1Q9Y4X1 527 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 PCDHGB2Q9Y5G2 931 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 MAU2Q9Y6X3 613 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 BDP1A6H8Y1 2624 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 CDH23Q9H251 3354 aa4.39□□□□□ -1.71
IFT20-205ENST00000578009 IGKV1D-42A0A075B6H8 117 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 ARPC4-TTLL3A0A0A6YYG9 625 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 TRDV1A0A1B0GX56 115 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 ISPDA4D126 451 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 OR2W5A6NFC9 320 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 A8MU76 341 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 NTN3O00634 580 aaPredicted RBP4.38□□□□□ -1.71
IFT20-205ENST00000578009 SLC30A4O14863 429 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 ALOX12BO75342 701 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 REM1O75628 298 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 SCRG1O75711 98 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 GPX5O75715 221 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 MT-ATP6P00846 226 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 HLA-DPB1P04440 258 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 GP1BAP07359 652 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 CD63P08962 238 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 HSMCR30P0CW71 290 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 SPTBP11277 2137 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 ZNF3P17036 446 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 FUT1P19526 365 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 WT1P19544 449 aaPredicted RBP4.38□□□□□ -1.71
IFT20-205ENST00000578009 SLC2A5P22732 501 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 IL12BP29460 328 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 GABRA5P31644 462 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 S100A5P33763 92 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 ATP6V1E1P36543 226 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 OPRL1P41146 370 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 GRK6P43250 576 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 HTR3AP46098 478 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 RFX3P48380 749 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 CENPAP49450 140 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 MAP2K6P52564 334 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 PPP5CP53041 499 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 EMP2P54851 167 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 SUMO3P55854 103 aaPredicted RBP4.38□□□□□ -1.71
IFT20-205ENST00000578009 SLC26A5P58743 744 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 TAS2R43P59537 309 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 LSM3P62310 102 aaKnown RBP4.38□□□□□ -1.71
IFT20-205ENST00000578009 ACTC1P68032 377 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 ACTA1P68133 377 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 ZFP36L1Q07352 338 aaKnown RBP4.38□□□□□ -1.71
IFT20-205ENST00000578009 CRYZQ08257 329 aaKnown RBP4.38□□□□□ -1.71
IFT20-205ENST00000578009 GALEQ14376 348 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 GGTLC2Q14390 218 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 TRAM1Q15629 374 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 CD226Q15762 336 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 C21orf62-AS1Q17RA5 79 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 VWA2Q5GFL6 755 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 SLC35D3Q5M8T2 416 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 CLEC12AQ5QGZ9 265 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 ZNF529Q6P280 563 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 NIPAL3Q6P499 406 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 C16orf87Q6PH81 154 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 TSSK4Q6SA08 328 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 TMEM205Q6UW68 189 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 HSDL2Q6YN16 418 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 TMPRSS9Q7Z410 1059 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 BCDIN3DQ7Z5W3 292 aaKnown RBP4.38□□□□□ -1.71
IFT20-205ENST00000578009 ANKRD37Q7Z713 158 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 PEG10Q86TG7 708 aaKnown RBP4.38□□□□□ -1.71
IFT20-205ENST00000578009 PPP1R3BQ86XI6 285 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 MEX3DQ86XN8 651 aaKnown RBP4.38□□□□□ -1.71
IFT20-205ENST00000578009 GATAD2AQ86YP4 633 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 C9orf40Q8IXQ3 194 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 GPALPP1Q8IXQ4 340 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 CADM2Q8N3J6 435 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 SLC15A4Q8N697 577 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 METTL27Q8N6F8 245 aaPredicted RBP4.38□□□□□ -1.71
IFT20-205ENST00000578009 ZNF321PQ8N8H1 164 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 POMGNT2Q8NAT1 580 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 SLC37A3Q8NCC5 494 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 ZBTB44Q8NCP5 570 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 OR5L2Q8NGL0 311 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 OR13C2Q8NGS9 318 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 OR5W2Q8NH69 310 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 PFN4Q8NHR9 129 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 NUBPLQ8TB37 319 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 HAVCR2Q8TDQ0 301 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 GRHL3Q8TE85 626 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 CHPT1Q8WUD6 406 aa4.38□□□□□ -1.71
IFT20-205ENST00000578009 METTL21AQ8WXB1 218 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms